|
Name : SPC_4388 (SPC_4388) Accession : YP_002639886.1 Strain : Salmonella enterica RKS4594 Genome accession: NC_012125 Putative virulence/resistance : Unknown Product : DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 4497820 - 4499184 bp Length : 1365 bp Strand : + Note : - DNA sequence : ATGAGCCATAAATCTGTTTCTGCAGTATCCATGCTGTTTAATGTCGGAGCTGAAACCGGTGTTCTGGGCGGACTGATGCT CGATAACGACCGCTGGGATGAAATTGCGCCGCTTCTGAATTCCGGAGATTTTTATTATGGCCAGCATCAGATCATTTTTC GGGAGATAGAACGGTTGGTCAGTGCTGGCCTGCCCATTGACCTGATAACCCTGTCCGAATCCATGGAGCGAAAAGATCTG CTGGAGCGGTGCGGGGGGGGCGCTTATCTGGCTGAACTGTCAAAAAACACGCCCAGCGCCGCCAATATCGTTGCTTATGC CGAAATTGTGCGCGAGTACAGTCGTAAGCGACGGCTGGTTAAGCTGGGGCATGAGCTACATCAACTGGCCTCAGTCGGCG ATGCGGATATACCCGGTCTGATTGAAAAGGCCGAAAAGCAGTTATTTAGTCTGGCTCAGCAGGCCTGTGACCCCGACATT TGTCTGAGCGTAACGACTCAGGTCGCTGACACGGTCAGCTGGCTGGAATCGGTCAGTGGGGGAAGCGGTGTGACCGGTAC AGCGACAGGTTTTGCTGAACTGGATGAGAAAACCTGTGGCTGGCAGGACGGTGACCTGATTTTACTGGGTGCCCGGCCAT CAATGGGGAAAACGGCAGAAGCGCTGAAACATGCCGTTGCTGCGCTGGAAGGCAGTCCCGGCAAGACCGTTCAGTTCTAC AGCATAGAGATGCCAACCCAGCAGCTGATAATGCGTCTGCTTTCAATGCTGGCCAGAGTGCCCTTCGATAACCTGCGCAA AGGTCTGCTGAGCGAAGGGCAGTGGAGTTTACTTGCGGATGCCGTAGCAAAACTGACCTCCTGGGAAGGACGTTTGCTGA TAGACGATACCAGTTATCAGACGCCTTCCACGTTACGTATCAGCGCGCGGCGTAATGTGCGTAAATACGGTCAGCCCTCA CTTATTCTTGTTGATTATCTTCAGTTAATGAGTTGTCCTGGCCGGGAGAACCGCACTCAGGAAATTCAGGAGATTTCCCG TTCGCTCAAGTCACTGGCCAAAGAGATAAGGTGCCCTGTGGCAGCTTTATCCCAGCTCAATCGCAGCGTTGAACAGCGTC AGGATAAACGTCCGATGGTCAGTGACCTTCGGGATTCCGGCTCACTGGAGCAGGATGCGGATGTCATCATGTTCCTGTAC CGCGATGAAGTTTATAACGAGCACTCCCCGGATAGAGGCATAGCTGAAATCATTCTGGGTAAGCAACGTCAGGGGCCGCT GGGCACTGTCAAAGTTCGCTTTGAGGGGGAGTATATGCGCTTCTCGGAGTATCACCTTGGTTATGGGGAGGTGAGCTATG GCTAA Protein sequence : MSHKSVSAVSMLFNVGAETGVLGGLMLDNDRWDEIAPLLNSGDFYYGQHQIIFREIERLVSAGLPIDLITLSESMERKDL LERCGGGAYLAELSKNTPSAANIVAYAEIVREYSRKRRLVKLGHELHQLASVGDADIPGLIEKAEKQLFSLAQQACDPDI CLSVTTQVADTVSWLESVSGGSGVTGTATGFAELDEKTCGWQDGDLILLGARPSMGKTAEALKHAVAALEGSPGKTVQFY SIEMPTQQLIMRLLSMLARVPFDNLRKGLLSEGQWSLLADAVAKLTSWEGRLLIDDTSYQTPSTLRISARRNVRKYGQPS LILVDYLQLMSCPGRENRTQEIQEISRSLKSLAKEIRCPVAALSQLNRSVEQRQDKRPMVSDLRDSGSLEQDADVIMFLY RDEVYNEHSPDRGIAEIILGKQRQGPLGTVKVRFEGEYMRFSEYHLGYGEVSYG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 0.0 | 99 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 0.0 | 99 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-108 | 59 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-113 | 58 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-113 | 58 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 7e-113 | 55 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-92 | 49 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 3e-78 | 48 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-80 | 48 |
