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Name : SPC_4326 (SPC_4326) Accession : YP_002639829.1 Strain : Salmonella enterica RKS4594 Genome accession: NC_012125 Putative virulence/resistance : Virulence Product : type-1 secretion protein Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 4429145 - 4431211 bp Length : 2067 bp Strand : + Note : - DNA sequence : ATGGATAAAAAACTAGAACCTTATTATTTAAGTGCGGAAACGGCATTATCTATAGTGTCTAAAAAATTCAACATAAAAAT TGACATCAAAGAGGATGATATAAATTTAAGATTTAAAAAGTACGACAGAAATAACACTGACGACTCTATACAAATGAAGA ATTTCTTTTTGTCGTTAGGGCTTTCTCTACAGGATATATTATTTAATAATGGTGAGGATTTACTAAATGAGCCTATGCCG ATTTTACTATTAACGCCAGAAATGAAGTGGATGGTGTGTGTGAGCGGCGGGCAAAAAATAAAGTTGGTAAACGCGCGCGG TGAACTCTGTTATGTTGAAATTGAAGATGAATATTTAAAAGAGTTATCTGCATTTAGTATACTACCTTTAAATAAAGTTG TTGATAGTATAAGAGTAAAAAATATCATAAAAAACTCTTTATCGATGAACAAGATTTTTTATACTAAATACTTCTTTTCA TCTCTTTTTATGGCAATTTTTGCGTTAACTATCCCAGTATTTAGTAATCTATTCTATGATAAGCTTGTTCCAAGTGCTTC GGTTTCATCTTTATTTGGCGTGGCTATAATTGTTGCTGTATTTATTGTTTTTGAGTTTATCCTTCGTACTTCGAAAGATA TTTATCAGTCTATCACAGCAAGGCAGGATGACGTCGATATTGATATCGCATTTCTTGAAGCGGTCCTGTATAGTAAAAAG AAAAATGGCAGATCCATGTCATCAGCATTTGTGCTATGGAATGAGTTTCAGAAAATTAAACCCGTTTTATTAAACTCGAT CTTTCAACGTATAGCCGATATTCCAATATTTATTATATTTCTCATTGTTATATATGTAAATTTAGGTCTGGTCGTTATTG TACCTGTTACCATGTTTATCGTCTCTATTATTATTTCCCTCGTTAACCACCATTATACTAATGAGTTAATGAACAAACAA AAAGAAGGACAGAAGAACAGGAATATTTTCATCTCAGAAGTTTTCTTATCTATTAAAATGATCCATACCTTAAATAATCA AGGTTTACTTTTTGATTGGGTCAACACATCAAATGAACAGTCGTATCTTAACCTGAAGATAAGGAAATTAAATCTTATCT ATCAATCTATATTGGGGAGTATGTCATCTATTACCCAAATAACTATTATGGTAATAGCCTTTTTTATGGTAATTAAGGGT GATGTTACCACTGGCGCAATTGTTTCATCTGTCATTGTCTCTGGTCGTATCTCCGGGATCATTTCGAATTTTTCTTCTAC ATTAATCTCTATTTTATCAGCAGAAAAAACCGGTAAGGATCTGCTTTCTTTTTTTGATGAAGATCAGGCAGAAAAAACAC CGGCATTACAGTCCATATCAAAGTGCAATGGCGATATCTCTATCCGGGGCGTGAGTTATCAGTATGATGCTCAATCTCCG ATGATTATTAATCGACTGTCTATAGACATACCTGCGGGGCAGCGTGTCGCAGTGATAGGCGAATGCGGAGCAGGAAAAAG CTCATTACTGGGAATGCTATCTGGCTACCTTTCGCCAACAGACGGCGCCATCTTATATGATGGATATAACTTAGGACATT TATCGCAGAACTTTTTTTCTCAGCATTTAAGCGTGGTGACGACACATGATGTTTTATTCACCGGAACCATTGAAAGTAAT TTCGCGTTAAAACCGCAAAACGACAGGGGCCGGGTACTCAAGGCGCTTCAGCTGGCGAACTGTGGTTTTATCTTGCAACA TCCTATGGGGCTGAAGTTTCCGGTGAATTTTATGGCTAAAAACCTGTCATCCGGACAGCAGCAGCAGTTATTATTAGCAC GTAGTCTGAGCAGTAACGCCAGCGTCTTTTTATGGGATGAACCAACATCAAATCTGGATGAGAATACCGAGAAGCAAATT TTTGATAACTTAGATGAGTTTATTCATGGGAAAACGTTGATCATGGTGACGCATCGTCGATATCTGATAAAGTATTTTGA CCGGGTTCTGGTAATGAAAGGTGGAAAAATAATCCGTGATTGTTCTCCGGATAAATTATTAATGTAA Protein sequence : MDKKLEPYYLSAETALSIVSKKFNIKIDIKEDDINLRFKKYDRNNTDDSIQMKNFFLSLGLSLQDILFNNGEDLLNEPMP ILLLTPEMKWMVCVSGGQKIKLVNARGELCYVEIEDEYLKELSAFSILPLNKVVDSIRVKNIIKNSLSMNKIFYTKYFFS SLFMAIFALTIPVFSNLFYDKLVPSASVSSLFGVAIIVAVFIVFEFILRTSKDIYQSITARQDDVDIDIAFLEAVLYSKK KNGRSMSSAFVLWNEFQKIKPVLLNSIFQRIADIPIFIIFLIVIYVNLGLVVIVPVTMFIVSIIISLVNHHYTNELMNKQ KEGQKNRNIFISEVFLSIKMIHTLNNQGLLFDWVNTSNEQSYLNLKIRKLNLIYQSILGSMSSITQITIMVIAFFMVIKG DVTTGAIVSSVIVSGRISGIISNFSSTLISILSAEKTGKDLLSFFDEDQAEKTPALQSISKCNGDISIRGVSYQYDAQSP MIINRLSIDIPAGQRVAVIGECGAGKSSLLGMLSGYLSPTDGAILYDGYNLGHLSQNFFSQHLSVVTTHDVLFTGTIESN FALKPQNDRGRVLKALQLANCGFILQHPMGLKFPVNFMAKNLSSGQQQQLLLARSLSSNASVFLWDEPTSNLDENTEKQI FDNLDEFIHGKTLIMVTHRRYLIKYFDRVLVMKGGKIIRDCSPDKLLM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SC4141 | YP_219128.1 | bacteriocin/lantibiotic ABC transporter | Not tested | SPI-4 | Protein | 0.0 | 100 |
| STY4460 | NP_458560.1 | putative type-1 secretion protein | Not tested | SPI-4 | Protein | 0.0 | 99 |
| STM4262 | NP_463127.1 | ABC-type bacteriocin/lantibiotic exporter | Not tested | SPI-4 | Protein | 0.0 | 99 |
| spi4_R | AAC26655.1 | ltkB homolog | Virulence | SPI-4 | Protein | 0.0 | 99 |
| siiF | CAE11798.1 | putative type-I secretion protein (putative inner membrane component) | Virulence | SPI-4 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SPC_4326 | YP_002639829.1 | type-1 secretion protein | VFG0582 | Protein | 0.0 | 99 |
