Gene Information

Name : ssb (SPC_4317)
Accession : YP_002639820.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 4406116 - 4406769 bp
Length : 654 bp
Strand : +
Note : binds to single stranded DNA and PriA helcase facilitate replication restart

DNA sequence : 
ATGCAACAATATGAGGTTCGCGCGAGTGACCTGGAACCTGCATCGCAGCTATTAAAATGCTACGTGGAAATGGTACACTC
ACGCGTTTACACTATTTATGAAACGTATTCAGGAGACTCAATTATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTTG
GTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGGCGGCGCTGTCGCCAACTTAACGCTGGCTACTTCTGAA
TCCTGGCGCGATAAGCAGACCGGCGAAATGAAAGAGCAGACTGAATGGCACCGGGTGGTGATGTTCGGCAAACTGGCGGA
AGTGGCCGGCGAATATCTGCGTAAAGGTTCTCAGGTGTATATCGAAGGTCAATTGCGTACCCGCAAGTGGACCGATCAGA
GTGGCCAGGAACGCTATACGACTGAAATTAACGTTCCGCAGATCGGCGGCGTGATGCAGATGCTGGGTGGTCGCCAGGGC
GGCGGCGCGCCGGCAGGCGGTCAGCAGCAGGGGGGTTGGGGTCAGCCACAACAACCTCAGCAGCCGCAGGGCGGCAACCA
GTTCAGCGGCGGCGCGCAGTCGCGTCCACAGCAATCCGCGCCAGCGCCGTCTAACGAACCGCCAATGGATTTTGACGACG
ACATTCCGTTCTGA

Protein sequence : 
MQQYEVRASDLEPASQLLKCYVEMVHSRVYTIYETYSGDSIMASRGVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSE
SWRDKQTGEMKEQTEWHRVVMFGKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQSGQERYTTEINVPQIGGVMQMLGGRQG
GGAPAGGQQQGGWGQPQQPQQPQGGNQFSGGAQSRPQQSAPAPSNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 4e-41 79
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 5e-41 63
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 8e-41 63
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 8e-41 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssb YP_002639820.1 single-stranded DNA-binding protein VFG0576 Protein 4e-53 100