Gene Information

Name : aldB (SPC_3760)
Accession : YP_002639278.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3805415 - 3806950 bp
Length : 1536 bp
Strand : -
Note : -

DNA sequence :
ATGACGAACAATCCCCCTTCAACACGTATTCAGCCAGGTGAATACGGGTACCCACTGAAGTTAAAAGCCCGCTATGACAA
TTTTATTGGTGGTGACTGGGTTGTGCCCGCCGACGGCGAATATTATCAAAACCTGACGCCAGTGACCGGCCAGCCGCTAT
GTGAAGTCGCCTCCTCCGGTAAAAAAGATATCGATTTAGCGCTCGACGCCGCGCATAAGGCGAAAGATAAGTGGGCGCAT
ACGTCAGTACAAGACCGTGCCGCTATCTTGTTTAAGATCGCCGATCGGATGGAACAAAACCTCGAACTGTTGGCGACAGC
GGAAACCTGGGATAACGGTAAACCGATTCGTGAAACCAGCGCCGCCGACGTACCGCTGGCGATCGATCATTTCCGCTATT
TCGCCTCCATACGTGCGCAGGAGGGCGGGATCAGCGAGGTTGATAGCGAAACTGTGGCCTACCATTTTCACGAACCGCTT
GGCGTCGTGGGACAGATAATCCCGTGGAACTTTCCGTTGTTGATGGCAAGCTGGAAAATGGCGCCAGCGCTGGCGGCGGG
TAACTGCGTGGTGCTTAAACCGGCACGCCTGACGCCGCTTTCCGTTCTGCTGTTAATGGAAGTCATTGGCGATCTGTTAC
CGCCGGGCGTCGTCAACGTCGTGAACGGCGCGGGCGGCGAGATCGGCGAATATCTGGCGACCTCGAAACGTATCGCGAAG
GTGGCGTTTACCGGTTCGACGGAAGTGGGTCAACAGATCATGCAGTACGCCACGCAGAACATTATTCCGGTGACGCTGGA
GTTAGGCGGCAAGTCGCCCAATATCTTCTTTGCTGACGTGATGGATGAGGAAGATGCGTTCTTTGATAAAGCGCTGGAGG
GATTTGCCCTGTTTGCCTTTAACCAGGGCGAGGTGTGTACCTGTCCAAGCCGTGCGCTGGTCCAGGAGTCTATCTATGAG
CGCTTTATGGAGCGCGCTATTCGCCGGGTAGAGAGCATTCGCAGCGGGAACCCGCTAGATAGCGGTACACAGATGGGGGC
GCAGGTCTCTCACGGCCAGCTTGAGACTATCCTCAATTATATCGATATCGGTAAAAAAGAGGGGGCCGATATTCTGACCG
GTGGGCGACGCAAGGAACTGGATGGCGAACTTAAAGAGGGCTATTACCTTGAGCCTACCATTCTGTTTGGTAAGAATAAT
ATGCGCGTCTTTCAGGAGGAGATCTTTGGCCCGGTGCTGGCGGTAACCACCTTTAAAACCATGGAGGAGGCGCTGGAAAT
CGCTAACGATACCCAATACGGCCTGGGCGCTGGCGTCTGGAGCCGCAATGGCAATCTGGCCTATAAGATGGGGCGCGGCA
TTCAGGCCGGGCGCGTATGGACCAACTGCTATCACGCCTATCCGGCACATGCTGCGTTCGGCGGCTATAAGCAGTCGGGC
ATCGGGCGCGAAACGCATAAGATGATGCTGGAACACTACCAGCAAACCAAGTGCCTGCTGGTGAGCTATTCCGATAAGCC
TCTGGGGCTGTTCTGA

Protein sequence :
MTNNPPSTRIQPGEYGYPLKLKARYDNFIGGDWVVPADGEYYQNLTPVTGQPLCEVASSGKKDIDLALDAAHKAKDKWAH
TSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETSAADVPLAIDHFRYFASIRAQEGGISEVDSETVAYHFHEPL
GVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEVIGDLLPPGVVNVVNGAGGEIGEYLATSKRIAK
VAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYE
RFMERAIRRVESIRSGNPLDSGTQMGAQVSHGQLETILNYIDIGKKEGADILTGGRRKELDGELKEGYYLEPTILFGKNN
MRVFQEEIFGPVLAVTTFKTMEEALEIANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQSG
IGRETHKMMLEHYQQTKCLLVSYSDKPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-138 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-143 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-143 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-143 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-142 63
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-53 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldB YP_002639278.1 aldehyde dehydrogenase VFG0082 Protein 4e-138 64