Gene Information

Name : SPC_3250 (SPC_3250)
Accession : YP_002638776.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator QseB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3279777 - 3280436 bp
Length : 660 bp
Strand : +
Note : response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes

DNA sequence : 
ATGCGAATTTTACTGGTAGAAGATGACACACTTATTGGCGATGGCATAAAAGCGGGCCTGAGTAAAATGGGTTTCAGCAT
CGACTGGTTTACCGAGGGACGCCCGGGCAAAGAGGCGCTTTACAGCGCGCCTTATGATGCGGTTATTTTAGATTTGACGC
TGCCAGGCATGGACGGACGGGATATTTTGCGCGAATGGCGCGAAAAGGGTAAACAGGAACCGGTGCTGATCCTGACGGCG
CGCGACGCGTTAGCAGAGCGTGTCGAGGGGCTACGTCTGGGCGCCGATGACTATTTATGTAAACCTTTCGCGCTCATTGA
GGTCGCCGCCCGTCTGGAGGCGCTGGTACGCCGCGCCAGCGGTCAGGCCAGTAGCGAATTGCACCACGGCCAGGTGACGC
TCAATCCAGGCAATCTCGTCGCGACGCTTGCCGGCGAACCACTGGCCCTAAAACCAAAAGAGTTCGCGTTGCTGGAACTC
TTACTGCGCAACAAAGGTCGCGTGCTGCCGCGCAAGCTTATTGAAGAGAAGCTGTATAACTGGGATGACGACGTGTCCAG
CAATGCAGTGGAAGTCCATGTTCATCATTTACGCCGCAAGCTCGGCAGCGAATTTATTCGCACCGTACACGGCATCGGCT
ACACCCTGGGTGACGCATGA

Protein sequence : 
MRILLVEDDTLIGDGIKAGLSKMGFSIDWFTEGRPGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGKQEPVLILTA
RDALAERVEGLRLGADDYLCKPFALIEVAARLEALVRRASGQASSELHHGQVTLNPGNLVATLAGEPLALKPKEFALLEL
LLRNKGRVLPRKLIEEKLYNWDDDVSSNAVEVHVHHLRRKLGSEFIRTVHGIGYTLGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-34 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPC_3250 YP_002638776.1 DNA-binding transcriptional regulator QseB BAC0487 Protein 1e-34 46
SPC_3250 YP_002638776.1 DNA-binding transcriptional regulator QseB BAC0308 Protein 2e-30 43
SPC_3250 YP_002638776.1 DNA-binding transcriptional regulator QseB BAC0638 Protein 6e-26 42
SPC_3250 YP_002638776.1 DNA-binding transcriptional regulator QseB BAC0347 Protein 7e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPC_3250 YP_002638776.1 DNA-binding transcriptional regulator QseB VFG0473 Protein 9e-35 47