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Name : safC (SPC_0311) Accession : - Strain : Salmonella enterica RKS4594 Genome accession: NC_012125 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 338078 - 340587 bp Length : 2510 bp Strand : + Note : frameshift compared to STM0301 in Salmonella typhimurium LT2 DNA sequence : ATGAAGCTCAAACAACCTGCCTTGCTACTGTTTATCGCGGGAGCGGTTCATTGCGCAAATGCGCACGCTTACACATTCGA TGCATCAATGTTGGGCGATGCAGCGAAAGGGGTTGATATGTCGCTCTTTAACCAGGGGGTACAACAGCCAGGGACTTATC GAGTGGACGTGATGGTGAATGGTAAACGTATCGACACCCGTGATGTGGTGTTCAAATTGGAAAAGGATGGGCAAGGAACG CCTTTTCTGGCTCCTTGTTTGACGGTCAGTCAGCTTTCACGCTACGGCGTAAAAACGGAAGATTACCCTCAGTTGTGGAA AGCAGCAAAGACCCCAGATGAGTGTGCGGATCTGACCGCCATTCCACAGGCTAAAGCGGTACTGGATATCAATAATCAGC AACTGCAACTGAGTATTCCGCAGTTGGCATTGCGTACGAAATTTAAGGGGATCGCTCCTGAAGATCTCTGGGATGATGGT ATTCCGGCGTTTCTGATGAACTACAGTGCGAGGACAATGCAGACGGATTACAAAATGGATATGGGGAGGCGTGACAACTC TTCCTGGGTACAACTGCAACCGGGAATCAATATAGGTGCGTGGCGTGTCCGCAATGCGACCAGTTGGCAGCGGAGTAGTC AACTGTCGGGGAAGTGGCAGGCAGCATATACCTATGCTGAGCGTGGACTGTACTCACTAAAAAGTCGTCTGACTCTGGGG CAAAAGACTTCGCAGGGGGAGATATTTGATAGTGTGCCATTTACCGGTGTGATGTTGGCATCGGATGACAACATGGTGCC CTACAGTGAGCGGCAGTTTGCTCCGGTAGTGCGTGGGATTGCCCGCACGCAGGCTCGGGTGGAGGTCAAACAGAATGGTT ACACCATTTACAACACCACTGTGGCGCCCGGACCGTTTGCACTGCGGGATCTGTCGGTAACAGACAGTAGTGGTGATCTG CATGTCACCGTGTGGGAGGCCGATGGCAGTACACAAATGTTTGTGGTGCCGTATCAGACCCCGGCGATAGCACTGCACCA GGGATATTTGAAGTACAGCCTGTTGGCGGGCCGATACCGATCGTCAGACTCTGCAACGGATAAGGCGCAGATCGCGCAGG CTACGTTGATGTATGGTCTGCCGTGGAATCTCACTGCATATGGCGGTATACAGAGTGCAACGCACTATCAAGCTGCATCG CTTGGTTTGGGGGTATCTCTCGGGCGGTGGGGGAGTTTATCTGTCGATGGAAGCGACACACACAGTCAGCGTCAGGGGGA AGCGGTACAGCAAGGAGCCTCCTGGCGACTGCGTTACAGCAACCAGCTGACTGCGACGGGAACAAATTTTTCTCTGACGA GATGGCAGTATGCCTCGCAGGGCTATAACACCTTATCCGATGTGCTCGACAGTTATCGACATGATGGCAACCGTCTATGG TCGTGGCGGGAAAATTTGCAGCCGAGCTCGCGTACCACCCTGATGTTGAGTCAGTCATGGGGGAGGCATTTGGGCAATCT GAGTTTAACCGGTTCCCGTACCGACTGGCGTAATCGCCCCGGTCATGATGACAGCTACGGACTGAGTTGGGGAACCTCTA TCGGAGGGGCTCGCTGTCATTGAACTGGAATCAAAACAGAACGCTGTGGCGCAATGGCGCGCACCGTAAAGAGAACATAA CCAGCCTGTGGTTCAGTATGTCATTAAGCCGCTGGACGGGGAATAATGTAAGTGCCAGTTGGCAGATGACTTCACCATCA CACGGTGGTCAGACGCAACAAGTGGGGGTCAACGGAGAGGCATTCAGTCAGCAACTGGATTGGGAGGTGCGTCAGAGTTA CCGTGCCGATGCCCCGCCAGGTGGTGGTAATAACAGCGCATTGCACTTGGCATGGAATGGGGGTTACGGCCTGTTAGGTG GTGACTATAGCTACAGCCGGGCGATGCGCCAGATGGGAGTCAATATCGCGGGAGGTATAGTTATCCACCATCATGGTGTG ACGCTGGGGCAACCTTTGCAAGGCTCAGTGGCGCTGGTTGAAGCGCCAGGGGCCTCGGGGGTGCCAGTTGGCGGCTGGCC TGGCGTTAAGACGGATTTTCGTGGCGACACCACAGTGGGCAACCTGAGCGTCTATCAGGAGAATACAGTCAGCCTCGATC CGTCGCGACTACCGGATGACGCAGAGGTCACACAAACCGATGTGCGCGTGGTGCCAACCGAAGGGGCGGTGGTGGAAGCG AAGTTTCACACTCGCATCGGGGCCAGGGCACTGATGACGCTGAAACGGGAAGATGGTAGCGCCATTCCTTTCGGGGCGCA GGTTACAGTCAATGGGCAGGATGGCAGTGCTGATCTGGTGGATACTGATAGCCAGGTTTATCTCACTGGTCTGGCGGATA AGGGCGAACTGACGGTGAAATGGGGAGCACAGCAATGTCGGGTTAACTACCACCTACCTGCCCATAAGGGAATCGCGGGC TTGTATCAAATGAGCGGTCTCTGCAGATAG Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | DNA | 0.0 | 98.5 |
