Gene Information

Name : safB (SPC_0310)
Accession : YP_002635939.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : periplasmic fimbrial chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 337257 - 338054 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence : 
GTGCCTTGTTTAAGGCGCAATACACATCAAATCATCTATTTTTCTTTTACAATTTTTGATATGAAAATAGTTAATTTTGC
TGTAATGGCGGTAGCTTTGTTCGCCACTAATTCTATGGTTTCAGTATATGCCGTCAACCAGCAATTAAATTCAGCCACTA
AATTATTCAGCGTGAAGCTGGGGGCTACACGAGTGATTTATCACGCTGGTACGGCTGGAGCGACGCTCTCGGTGAGCAAC
CCGCAGAATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGCAGACAAAAGTTCGCCTGCTCCCTTTTTGGTGATGCC
GCCTCTATTTCGTTTAGAAGCGAACCAGCAGAGTCAACTGCGTATTGTCCGTACTGGTGGTGACATGCCAACGGATCGTG
AGACTTTACAGTGGGTCTGTATAAAGGCGGTACCACACGAAAATGAACCGTCGGATACACAGGCTAAGGGCGCGACCCTT
GACCTCAATTTGTCCATCAACGCCTGTGATAAGCTGATTTTCCGCCCGGATGCCGTGAAGGGGACGCCGGAAGATGTTGC
AGGAAATTTAAGATGGGTGGAGACGGGCAACAAACTTAAGGTGGAGAACCCCACCCCGTTTTACATGAATTTAGCCTCTG
TCACAGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATGTCCCCCCCTTTGCTGACAAAACACTAAATATGCCAGGTAGT
GCCCATGGTGATATCGAGTGGAGAGTTATTACAGACTTTGGTGGTGAAAGTCATCCGTTCCACTACGTTCTTAAATAA

Protein sequence : 
MPCLRRNTHQIIYFSFTIFDMKIVNFAVMAVALFATNSMVSVYAVNQQLNSATKLFSVKLGATRVIYHAGTAGATLSVSN
PQNYPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETLQWVCIKAVPHENEPSDTQAKGATL
DLNLSINACDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYVPPFADKTLNMPGS
AHGDIEWRVITDFGGESHPFHYVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 1e-104 90
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 2e-54 46
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 2e-54 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
safB YP_002635939.1 periplasmic fimbrial chaperone protein VFG0943 Protein 1e-51 49
safB YP_002635939.1 periplasmic fimbrial chaperone protein VFG0858 Protein 2e-51 48
safB YP_002635939.1 periplasmic fimbrial chaperone protein VFG0852 Protein 2e-53 47
safB YP_002635939.1 periplasmic fimbrial chaperone protein VFG0850 Protein 4e-55 47