Gene Information

Name : sitA (SPC_2904)
Accession : YP_002638438.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : iron transport protein, periplasmic-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 2941170 - 2942087 bp
Length : 918 bp
Strand : +
Note : -

DNA sequence : 
ATGACGAATCTACATCGTCTGAAAACACTCCTGCTTGCCGGTATTGTTGCGATACTCGCGCTATCGCCAGCCTATGCAAA
AGAGAAATTTAAAGTCATCACCACGTTTACCGTTATTGCCGACATGGCGAAAAACGTGGCGGGCGACGCAGCGGAAGTCA
GCTCAATTACCAAGCCCGGCGCTGAAATCCATGAGTATCAGCCAACGCCCGGCGATATTAAACGAGCGCAGGGGGCACAG
CTTATCCTCGCGAATGGTCTGAACCTGGAGCGATGGTTCGCCCGATTTTATCAGCACCTTTCCGGCGTACCGGAAGTCGT
CGTCTCTACCGGCGTCAAACCGATGGGCATTACCGAAGGCCCGTATAACGGTAAACCGAACCCGCACGCCTGGATGTCGG
CAGAAAACGCGCTGATTTATGTCGATAACATTCGCGACGCCCTGGTGAAGTACGATCCGGATAATGCGCAGATCTATAAG
CAAAATGCCGAACGCTATAAAGCGAAAATTCGCCAGATGGCCGATCCGTTGCGTGCCGAACTGGAAAAAATTCCCGCCGA
TCAGCGCTGGCTGGTCACCAGTGAAGGCGCGTTCTCTTACCTGGCGCGCGATAACGACATGAAAGAGCTTTATCTCTGGC
CAATTAACGCCGATCAACAGGGGACGCCAAAACAGGTGCGTAAAGTGATTGATACCATTAAAAAGCACCATATTCCCGCC
ATCTTTAGCGAGAGTACGGTTTCCGATAAACCCGCCCGCCAGGTCGCGCGTGAATCCGGCGCGCATTATGGCGGCGTACT
GTATGTCGATTCTCTGAGCGCCGCTGACGGCCCTGTGCCAACCTATCTGGATCTGCTGCGCGTCACGACCGAAACCATCG
TCAACGGCATTAACGACGGACTGAGGAGTCAACAATGA

Protein sequence : 
MTNLHRLKTLLLAGIVAILALSPAYAKEKFKVITTFTVIADMAKNVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQ
LILANGLNLERWFARFYQHLSGVPEVVVSTGVKPMGITEGPYNGKPNPHAWMSAENALIYVDNIRDALVKYDPDNAQIYK
QNAERYKAKIRQMADPLRAELEKIPADQRWLVTSEGAFSYLARDNDMKELYLWPINADQQGTPKQVRKVIDTIKKHHIPA
IFSESTVSDKPARQVARESGAHYGGVLYVDSLSAADGPVPTYLDLLRVTTETIVNGINDGLRSQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-135 100
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-135 99
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-135 99
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-135 99
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-135 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_002638438.1 iron transport protein, periplasmic-binding protein BAC0349 Protein 1e-135 99
sitA YP_002638438.1 iron transport protein, periplasmic-binding protein BAC0439 Protein 8e-90 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_002638438.1 iron transport protein, periplasmic-binding protein VFG0525 Protein 1e-135 99