Gene Information

Name : SPC_2339 (SPC_2339)
Accession : YP_002637897.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 2390149 - 2390877 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGTATTCTATCGGCGAATTTGCCAGACTATGCGGTATCAATGCCGCCACACTAAGGGCATGGCAGCGACGCTATGG
TTTATTGAAACCGCAGCGTACTGATGGCGGACATCGCTTATACAGCGATGACGATATTCGACAAGCGCTTAGCATTCTCG
ACTGGGTGAGAAAAGGCGTACCGATAAGCCAGGTCAAACCCCTACTGTCGCGTCCGGTCATTCGCCTGGGCGATAACTGG
ATAACGATCCAGGAGACGATGCTTCAACATCTCCACGAAGGGCGAATTGACGCGCTGCGGCAGTTGATTTATGACTGTGG
CCGGGAATATCCCCGCGCAGAACTGGTGACCCATTTATTGCGTCCGTTGCGCAACAAAGTGTCAGCGCATCTTCCCGCCG
TGATGACGCTGCGCGAAATACTGGATGGCATCATTATTGCTTACACCTCTTTTTGCCTTGAAGGCGACAGAAAAGCGCCT
AGCAACAATGCCTTTATTAGCGGATGGCATCTCTCGGATCAGTGTGAAATCTGGCTGGAAGCGTTGACTCGTACCGGACA
AAAGCTGCGGCTCAATGTGCTTCCCTCTCCACCAGCCGTGCTGGCGCCCGAGCTGTTCGCCCAGAGAAAATGGTTCCTGG
TGACCACCGGCAAGCTCACTGCCGGGCAGAAAAAACAGCTTGCCCAGTGGCGCAACGTGGTCGCTTCGCTGGAGGTTATC
ACACTATAA

Protein sequence : 
MSYSIGEFARLCGINAATLRAWQRRYGLLKPQRTDGGHRLYSDDDIRQALSILDWVRKGVPISQVKPLLSRPVIRLGDNW
ITIQETMLQHLHEGRIDALRQLIYDCGREYPRAELVTHLLRPLRNKVSAHLPAVMTLREILDGIIIAYTSFCLEGDRKAP
SNNAFISGWHLSDQCEIWLEALTRTGQKLRLNVLPSPPAVLAPELFAQRKWFLVTTGKLTAGQKKQLAQWRNVVASLEVI
TL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 2e-110 99
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 2e-110 99
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 2e-111 99
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 9e-110 98
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 7e-110 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPC_2339 YP_002637897.1 transcriptional regulator VFG0491 Protein 4e-110 98