Gene Information

Name : sseB (SPC_2331)
Accession : YP_002637889.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : pathogenicity island effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2381674 - 2382264 bp
Length : 591 bp
Strand : -
Note : -

DNA sequence : 
ATGTCTTCAGGAAACATCTTATGGGGAAGTCAAAACCCTATTGTGTTTAAAAATAGCTTCGGCGTTAGCAACACTGATAC
CGGGGGGCAGGATGACTTATCCCAGCAAAATCCGTTTGCCGAAGGGTATGGTGTTTTGCTTATTCTCCTTATGGTTATTC
AGGCTATTGCAAACGATAAATTTATTGAAGTCCAGAAGAACGCTGAACGTGCCAGAAATACCCAGGAAAAGTCAAATGAG
ATGGATGAGGTGATTGCTAAAGCAGCCAAAGGGGATGCTAAAACCAAAGAGGAGGTGCCTGATGACGTAATTAAATACAT
GCACGATAATGGTATTCTCATCGATGGTATGACCATTGATGAATATATGGCTAAATATGGCGATCATGGGAAGCTGGATA
AAGGTGGTCTACAGGCGGTCAAAGCGGCTTTGGATAATGACGCCAACCGGAATACCGATCTTATGAGTCAGGGGCAGATA
ACAATTCAAAAAATGTCTCAGGAGCTTAACGCTGTCCTTACCCAACTGACAGGGCTTATCAGTAAGTGGGGGGAAATTTC
CAGTATGATAGCGCAGAAAACGTACTCATGA

Protein sequence : 
MSSGNILWGSQNPIVFKNSFGVSNTDTGGQDDLSQQNPFAEGYGVLLILLMVIQAIANDKFIEVQKNAERARNTQEKSNE
MDEVIAKAAKGDAKTKEEVPDDVIKYMHDNGILIDGMTIDEYMAKYGDHGKLDKGGLQAVKAALDNDANRNTDLMSQGQI
TIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseB YP_216406.1 secretion system effector protein SseB Virulence SPI-2 Protein 3e-86 99
sseB NP_456130.1 putative pathogenicity island effector effector protein Virulence SPI-2 Protein 2e-85 97
sseB NP_805069.1 pathogenicity island effector protein Virulence SPI-2 Protein 2e-85 97
sseB NP_460363.1 translocation machinery component Virulence SPI-2 Protein 2e-85 97
sseB AAC28879.1 putative secreted protein Virulence SPI-2 Protein 1e-85 97
sseB CAA12185.1 SseB Virulence SPI-2 Protein 1e-85 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sseB YP_002637889.1 pathogenicity island effector protein VFG0499 Protein 5e-86 97