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Name : sseC (SPC_2329) Accession : YP_002637887.1 Strain : Salmonella enterica RKS4594 Genome accession: NC_012125 Putative virulence/resistance : Virulence Product : pathogenicity island effector protein Function : - COG functional category : S : Function unknown COG ID : COG5613 EC number : - Position : 2379747 - 2381201 bp Length : 1455 bp Strand : - Note : - DNA sequence : ATGAATCGAATTCACAGTAATAGCGACAGCGCCGCAGGAGTAACCGCCTTAACACATCATCACTTAAGCAATGTCAGTTG CGTTTCCTCGGGTTCGCTGGGAAAGCGCCAGCATCGTGTGAATTCTACTTTTGGCGATGGCAACGCCGCGTGCCTGTTAT CAGGGAAAATTAGTCTTCAGGAGGCAAGCAATGCGTTGAAGCAACTGCTTGATGCCGTACCCGGAAATCATAAGCGTCCA TCATTGCCTGACTTTTTGCAGACCAATCCCGCGGTTTTATCAATGTTGATGACGACATTAATACTCAGCGTCTTTGGTAA TAACGCTCAATCGTTATGCCAACAGCTTGAGCGGGCAACTGAGGTGCAAAATGTATTACGTGATAAGCAGGTAAAGGAGT ATCAGGAGCAGATCCAGAAAGCGATAGAGCAGGAGGATAAAGCGCGTAAAGCGGGCATTTTTGGCGCTATTTTTGACTGG ATTACCGGCATATTTGAAACTGTGATTGGCGCCTTAAAAGTTGTGGAGGGTTTTCTGTCCGGTAATCCCGCAGAAATGGC TAGCGGCGTAGCTTATATAGCCGCAGGTTGTGCAGGAATGGTTAAAGCCGGAGCCGAAACGGCAATGATGTGCGGTGCTG ACCACGATACCTGTCAGGCAATTATTGACGTGACAAGTAAGATTCAATTTGGTTGTGAAGCCGTCGCGCTGGCACTGGAT GTTTTCCAGATTGGCCGTGCTTTTATGGCGACGAGAGGTTTATCTGGCGCAGCTGCAAAAGTGCTTGACTCCGGTTTTGG CGAGGAAGTGGTTGAGCGTATGGTAGGCGCAGGGGAAGCAGAAATAGAGGAGTTGGCTGAAAAGTTTGGCGAAGAAGTGA GTGAAAGTTTTCTCAAACAATTTGAGCCGCTTGAACGTGAAATGGTTATAGCGAATGAGATGGCAGAGGAGTCTGCCGAA TTTTCTCGTGAGGTAGAAAATAATATGACGCGAAGCGCGGGAAAAAGCTTTACGAAAGAGGGGGTGAAAGCCATGGCAAA AGAAGCGGCAAAAGAAGCCCTGGAAAAATATGCGCAAGAAGGGGAAAAATTTCTGTTAAAAAATTTTCGTAAGAAAGTTC TCTGGAATATGTTCAAAAAAATCCTGTATGCCTTACTGAGGGATTGTTCATTTAAAGGCTTACAGACTATCAGATGTGCA ACCGAGGGCGCCAGTCAGATGAATACTGGCATGGTTAACACAGAAAAAGCGAAGCTCGAAAAGAAAATAGAGCAATTAAT AACTCAGCAACGGTTTCTGGATTTCATAATGCAACAAACGGAAGACCAAAAAAAGATAGAACAAAAACGCTTAGAGGAGC TTTATAAGAGTAGCGGTGCCGCGCTTAGAGATGTATTAGATACCATTGATCACTATAGTAGCGCTCAGGCGAGAATAGCT GGCTGTCGCGCTTAA Protein sequence : MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQEASNALKQLLDAVPGNHKRP SLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERATEVQNVLRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDW ITGIFETVIGALKVVEGFLSGNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD VFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGEAEIEELAEKFGEEVSESFLKQFEPLEREMVIANEMAEESAE FSREVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKYAQEGEKFLLKNFRKKVLWNMFKKILYALLRDCSFKGLQTIRCA TEGASQMNTGMVNTEKAKLEKKIEQLITQQRFLDFIMQQTEDQKKIEQKRLEELYKSSGAALRDVLDTIDHYSSAQARIA GCRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sseC | YP_216408.1 | secretion system effector protein SseC | Virulence | SPI-2 | Protein | 0.0 | 99 |
| sseC | CAA12187.1 | SseC | Virulence | SPI-2 | Protein | 0.0 | 96 |
| sseC | AAC28881.1 | SseC | Virulence | SPI-2 | Protein | 0.0 | 96 |
| sseC | NP_460365.1 | translocation machinery component | Virulence | SPI-2 | Protein | 0.0 | 96 |
| sseC | NP_456128.1 | putative pathogenicity island effector protein | Virulence | SPI-2 | Protein | 0.0 | 95 |
| sseC | NP_805071.1 | pathogenicity island effector protein | Virulence | SPI-2 | Protein | 0.0 | 95 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sseC | YP_002637887.1 | pathogenicity island effector protein | VFG0501 | Protein | 0.0 | 96 |
