Gene Information

Name : sseF (SPC_2325)
Accession : YP_002637883.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : pathogenicity island effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2377441 - 2378223 bp
Length : 783 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATTCATATTCCGTCAGCGGCAAGTAATATAGTCGATGGTAATAGTCCTCCTTCCGATATACAAGCGAAGGAGGC
ATCGTTTCCTCCCCCTGAAATTCCAGCCCCTGGCACCCCCGCAGCCCCAGTGCTGCTTACGCCTGAACAAATAAGGCAGC
AGAAGGATTATGCGATACATTTTATGCAATACACTATTCGTGCGCTGGGTGCGACAGTCGTGTTTGGATTATCGGTTGCT
GCAGCGGTAATTTCTGGCGGGGCAGGATTACCCATTGCTATTCTTGCGGGGGCGGCGCTCGTGATTGCTATTGGGGATGC
TTGCTGTGCGTATCATAATTATCAATTGATATGTCAGCAAAAGGAGCCGTTACAAACCGCCAGTGATAGCGTTGCTCTTG
TGGTCAGTGCGCTGGCCTTAAAATGTGGGGCAAGTCTTAACTGCGCTAACACCCTTGCTAATTGTCTTTCTTCATTAATA
CGTTCAGGAATCGCTATTTCTTCGTTGGTTATACAACTACAGTTTCCACTGCCCGCCGCTGAAAATATAGCGGCCTCTTT
GGACATGGGGAGTGTAATTACCTCCGTTAGCCTGACGGCGATAGGTGCGGTACTGGATTATTGCCTTGCCCGCCCCTCTG
GCGACGATCAGGAAAATTCTGTTGATGAACTTTATGCCGATCCCAGTGCGTTATTGGCGGAACAAATGGCATCGCTCTGC
CAATCTGCTACTACACCTGCATTAATGGACAGTTCTGGTCATACATCTCGGGGAGAACCATGA

Protein sequence : 
MKIHIPSAASNIVDGNSPPSDIQAKEASFPPPEIPAPGTPAAPVLLTPEQIRQQKDYAIHFMQYTIRALGATVVFGLSVA
AAVISGGAGLPIAILAGAALVIAIGDACCAYHNYQLICQQKEPLQTASDSVALVVSALALKCGASLNCANTLANCLSSLI
RSGIAISSLVIQLQFPLPAAENIAASLDMGSVITSVSLTAIGAVLDYCLARPSGDDQENSVDELYADPSALLAEQMASLC
QSATTPALMDSSGHTSRGEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseF YP_216412.1 secretion system effector protein SseF Virulence SPI-2 Protein 7e-91 100
sseF CAA12191.1 SseF Virulence SPI-2 Protein 2e-84 96
sseF AAC28885.1 SseF Virulence SPI-2 Protein 7e-86 96
sseF NP_460369.1 secreted effector protein Virulence SPI-2 Protein 9e-86 96
sseF NP_456124.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 1e-85 95
sseF NP_805075.1 pathogenicity island effector protein Virulence SPI-2 Protein 1e-85 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sseF YP_002637883.1 pathogenicity island effector protein VFG0505 Protein 4e-86 96