Gene Information

Name : ssaJ (SPC_2320)
Accession : YP_002637878.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : pathogenicity island lipoprotein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4669
EC number : -
Position : 2375172 - 2375861 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence :
GTGGATCTTTATCGCTCATTGCCAGAAGATGAGGCGAATCAAATGCTGGCATTACTTATGCAGCATCATATTGATGCGGA
AAAAAAACAGGAAGAGGATGGTGTAACCTTACGTGTCGAGCAGTCGCAGTTTATTAATGCGGTTGAGCTACTTAGACTTA
ACGGTTATCCGCATAGGCAGTTTACAACGGCGGATAAGATGTTTCCGGCTAATCAGTTAGTGGTATCACCCCAGGAAGAA
CAGCAGAAGATTAATTTTTTAAAAGAACAAAGAATTGAAGGAATGCTGAGTCAGATGGAGGGCGTGATTAATGCAAAAGT
GACCATTGCGCTACCGACTTATGATGAGGGAAGTAACGCTTCTCCGAGCTCAGTTGCCGTATTTATAAAATATTCACCTC
AGGTCAATATGGAGGCCTTTCGGGTAAAAATTAAAGATTTAATAGAGATGTCAATCCCTGGGTTGCAATACAGTAAGATT
AGTATCTTGATGCAGCCTGCTGAATTCAGAATGGTACCTGATGTACCCGCGAGACAAACATTCTGGATTATGGACGTGAT
CAACGCCAATAAAGGGAAGGTGGAGAAGTGGTTGATGAAATACCCTTATCAGTTGATGTTATCGTTGACAGGACTGTTAT
TAGGAGTGGGCATCCTGATCGGCTATTTTTGCCTGAGACGCCGTTTTTGA

Protein sequence :
MDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEE
QQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVEKWLMKYPYQLMLSLTGLLLGVGILIGYFCLRRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaJ NP_460374.1 needle complex inner membrane lipoprotein Virulence SPI-2 Protein 5e-94 99
ssaJ NP_456119.1 putative pathogenicity island lipoprotein Virulence SPI-2 Protein 7e-95 99
ssaJ NP_805080.1 pathogenicity island lipoprotein Virulence SPI-2 Protein 7e-95 99
ssaJ YP_216417.1 secretion system apparatus protein SsaJ Virulence SPI-2 Protein 2e-95 99
ssaJ CAA70532.1 secretion system apparatus Virulence SPI-2 Protein 3e-94 99
ssaJ CAA12196.1 SsaJ Virulence SPI-2 Protein 1e-74 99
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 8e-47 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaJ YP_002637878.1 pathogenicity island lipoprotein VFG0510 Protein 2e-94 99