Gene Information

Name : ssaK (SPC_2318)
Accession : YP_002637876.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2373935 - 2374609 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTTTTACTTCACTTCCTCTGACGGAAATTAACCATAAGCTACCCGCTCGAAATATTATTGAGTCACCGTGGATAAC
ATTACAATTAACTTTATTTGCACAAGAACAACAAGCTAAGAGCGTTTCACATGCTATTGTGAGCTCCGCTTACCGTAAGG
CTGAAAAAATCATCCGAGACGCCTATCGTTATCAGCGTGAACAGAAAGTTGAGCAGCAACAAGAACTAGCGTGGTTGCGT
AAAAATACGCTGGAAAAAATGGAAGTGGAATGGCTGGAACAGCATGTAAAACACTTACAAGACGATGAAAATCAATTTCG
TTCATTGGTCGATCAAGCAGCGCATCATATTAAAAATAGTATAGAACAGGTTCTGTTGGCCTGGTTCGACCAACAGTCGG
TAGACAGTGTTATGTGCCATCGTCTGGCACGCCAGGCCACGGCTATGGCGGAAGAGGGAGCGCTTTATTTGCGTATTCAT
CCTGAAAAAGAGGCATTGATGCGTGAAACTTTTGGCAAGCGGTTTACGTTGATTATCGAGCCTGGTTTCTCTCCCGATCA
GGCTGAACTTTCCTCAACACGATATGCCGTTGAATTTTCACTTTCTCGTCATTTCAACGCGTTACTGAAATGGTTACGTA
ATGGTGAAGATAAAAGAGGTAGCGATGAATATTAA

Protein sequence : 
MSFTSLPLTEINHKLPARNIIESPWITLQLTLFAQEQQAKSVSHAIVSSAYRKAEKIIRDAYRYQREQKVEQQQELAWLR
KNTLEKMEVEWLEQHVKHLQDDENQFRSLVDQAAHHIKNSIEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIH
PEKEALMRETFGKRFTLIIEPGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDKRGSDEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaK YP_216419.1 secretion system apparatus protein SsaK Virulence SPI-2 Protein 7e-102 100
ssaK NP_460376.1 type III secretion system apparatus protein Virulence SPI-2 Protein 6e-99 99
ssaK CAA70533.1 secretion system apparatus Virulence SPI-2 Protein 1e-97 99
STY1709 NP_456117.1 putative pathogenicity island protein Virulence SPI-2 Protein 3e-100 98
t1279 NP_805082.1 pathogenicity island protein Not tested SPI-2 Protein 3e-100 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaK YP_002637876.1 pathogenicity island protein VFG0511 Protein 2e-99 99