Gene Information

Name : ssaT (SPC_2308)
Accession : YP_002637866.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : type III secretion protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 2365764 - 2366543 bp
Length : 780 bp
Strand : -
Note : -

DNA sequence : 
ATGGCACAACAGGTAAATGAGTGGCTTATTGCATTGGCTGTGGCTTTTATTCGACCATTAAGCCTTTCTTTATTACTTCC
CCTATTAAAAAGTGGCAGTTTAGGGGCCGCTCTTTTACGTAATGGCGTGCTTATGTCACTTACCTTTCCCATATTACCAA
TCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGTTGGTTAGGGTTAGTCACCGGAGAGGTTATTATT
GGTTTTTTAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGGCGGGGTTTCTGCTTGATACTTTACGTGG
CGCGACAATGGGTACGATATTCAATTCTACAATAGAAGCTGAAACCTCACTTTTTGGCTTGCTTTTCAGCCAGTTCTTGT
GTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAACATTCTGTATGAGTCATATCAATATTTACCACCAGGG
CGTACTTTATTATTTGACCAGCAATTTTTAAAATATATCCAGGCAGAGTGGAGAACGCTTTATCAATTATGTATCAGCTT
CTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTTTTAAATCGGTCGGCACAACAATTGAATG
TGTTTTTCTTCTCAATGCCGCTCAAAAGTATATTGGTTCTACTGACGCTCCTGATCTCATTCCCTTATGCTCTTCATCAC
TATTTGGTTGAAAGCGATAAATTTTATATTTATCTAAAAGACTGGTTTCCATCTGTATGA

Protein sequence : 
MAQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGAALLRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVII
GFLIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPG
RTLLFDQQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHH
YLVESDKFYIYLKDWFPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 2e-98 99
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 2e-98 99
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 1e-98 99
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 1e-98 99
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 2e-98 99
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 5e-45 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaT YP_002637866.1 type III secretion protein VFG0521 Protein 8e-99 99