Gene Information

Name : yadB (SPC_0199)
Accession : YP_002635830.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Unknown
Product : glutamyl-Q tRNA(Asp) synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0008
EC number : -
Position : 211858 - 212799 bp
Length : 942 bp
Strand : -
Note : this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the

DNA sequence :
ATGACAGGCGGGAGTTTTCCCGCCTTATTCTTTATTGCCCGCAGCATGACTGACTCACACTATATTGGCCGTTTCGCGCC
GTCGCCATCCGGCGAACTGCATTTCGGCTCGTTAATCGCCGCCCTCGGCAGCTATCTACAAGCCCGTGCGCAACGCGGAA
TTTGGCGCGTTCGCATCGAGGATATCGACCCCCCACGTGAAGTTCCCGGTGCCGCAGCGACCATTCTGCGCCAGCTGGAA
CATTACGGCCTGCACTGGGATGGCGAGGTCTTATGGCAATCACAGCGTCATGAGGCTTATTGCGAGGCGCTGGCCTGGCT
TCACGAGCAGGGACTGAGCTACTACTGCACTTGCCCCCGCTCGCGCATTCAGCGTCTGGGCGGTATTTACGACGGCCATT
GCCGGACGTTATGCCACGGGCCGGAGAATGCCGCCGTCAGAATTAAACAGCAGCATCCGGTGATGCATTTCCATGATGCC
TTGCGCGGCGACATCCAGGCTGACCCACAGCTGGCGAGCGAAGATTTTATTATCCACCGCCGCGACGGACTGTTTGCTTA
TAATCTGGCCGTGGTGGTCGACGATCATTTTCAGGGGGTGACGGAGATCGTCCGCGGCGCAGATTTAATCGAACCCACTG
TCCGACAACTTTCGCTGTATAAACAGTTTGGCTGGCGTGCGCCAGGCTACGTGCACCTTCCGCTGGCGCTCAACGAACAA
GGCGCTAAACTTTCCAAGCAAAATCATGCCCCTGCGCTTGCGACAGGCGATCCGCGCCCGGTACTGGTCCAGGCATTGCG
CTTTTTAGGCCAACGCGACGTCGTAGCGTGGCAGGAGATGTCTGTTGAGGAGTTGCTGCGCTTTGCAGTGGCGCACTGGA
GGCTTACAGCCGTACCCACATCGGCTAATGTAAATCCGGCATTCTCAAATGCGTCTCGCTGA

Protein sequence :
MTGGSFPALFFIARSMTDSHYIGRFAPSPSGELHFGSLIAALGSYLQARAQRGIWRVRIEDIDPPREVPGAAATILRQLE
HYGLHWDGEVLWQSQRHEAYCEALAWLHEQGLSYYCTCPRSRIQRLGGIYDGHCRTLCHGPENAAVRIKQQHPVMHFHDA
LRGDIQADPQLASEDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQLSLYKQFGWRAPGYVHLPLALNEQ
GAKLSKQNHAPALATGDPRPVLVQALRFLGQRDVVAWQEMSVEELLRFAVAHWRLTAVPTSANVNPAFSNASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00313 YP_008207778.1 Glutamyl- and glutaminyl-tRNA synthetase Not tested AbaR25 Protein 5e-51 43
BJAB0868_00317 YP_008211643.1 Glutamyl- and glutaminyl-tRNA synthetase Not tested AbaR26 Protein 5e-51 43