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Name : stiC (SPC_0188) Accession : YP_002635819.1 Strain : Salmonella enterica RKS4594 Genome accession: NC_012125 Putative virulence/resistance : Virulence Product : fimbriae usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 201505 - 204006 bp Length : 2502 bp Strand : - Note : - DNA sequence : GTGTGTATCGCGCTGGGCAGCACGTTCACACACGTTGCATGGGCGCGCGACTATTTCAATCCGGCATTTATTGAAAACCA TGGGCAGGCGAATCGCACAAGCGTCGATCTGTCGACATTTGATAACGACAAAAGCCAGCTGCCTGGCACCTATTACGTCA CTATCAATATCAATAAAACAGAAATCGGCACACGAAACGTTGATTTTCAACTCGCGACGCTCAGTGACGGTCAACAGGCA TTACAGGGCTGTTTACGGCTCCAGGAACTAAAAGATAACGGCGTCAAAACCGACCTTTTTCCAACGCTGGAGAGTGAAAA AGGCTGCGTCGATCTCAACGTTATCCCCGGCGCCAGCCAGCGGTTTGATTTTCAGCGACAGGCATTATCAGTAAGCATCC CGCAACTCTACATCGCCAACAACGCGCGCGGCTACGTACCGCCGGAAAAGTGGCAGGAGGGGATTACCGCGCTGATGCTG AACTACAGCTTCAGCGGCTATAAAGAGTACGGTTCCAGCGAGGATTCCGACGATGCGGAATCGAAGTATCTCGCTCTCCA GCCGGGTTTTAACCTCGGGCCGTGGCGTTTTCGCAACTACAGTAACTGGAGTTCAAATAACGGCGAGAGCGGTAGCTGGA ACAGCGTTTATAACTATTTACAGCGCGACATTATCGCGCTGAAAAGCCAGTTCACCGCCGGAGACAGCAATACGCCATCC GACGTGTTCGACAGCGTACCTTTTCGCGGCCTCCAGCTCACCTCTGACGATCAAATGCAGCCCAACAGCCAGCGTGGTTA CGCCCCGACGATTCGCGGCATTGCCCGCTCAAACGCGCAGGTTATCGTGCGGCAAAACGGCTATATCGCCTATCAGACCG CCGTTTCGCCGGGCGAATTTGAAATCAACGATATGTTTCCCACCGGCAGCAACGGCGACTATGACGTAACGGTAAAAGAA GCCGACGGCAGCGAACAGCATTTTATCGTGCCCTACTCTTCGCTGCCGATTCTGCAGCGCACCGGACGGGCAAAATACAG CGTGACCGTGGGTAAATACCGCGATTATAACAACCACACGCTGGACGACTTCGGCCAGGCGACCCTGCTGTACGGCCTGC CGTGGGGCATCACCCTGTACGGCGGCAGCCAGATTGCCGGCGATAAATACCAGTCCGTCGCCTTCGGCGTCGGGCAAAAT ATGCAGATGCTGGGGGCCATTTCCCTGGACAGCATCTGGTCGCACGCCAAATTTGACGATGGCCGCAAAGAAATCGGGCA ATCCTGGCGCGTCCGCTACAGCAAGGGCGTCGTCAGTACGGGCACCACGTTTTCGCTGGCCGGCTATCGTTACGCCAGCG AAAACTACAATTCGCTGAGCGAGGTGATCAACCCGGACGATGATTTTTATGATAACTACGGCAAGCGCCATAATCGTTTC GAAGCTTCGGTCAACCAGCAAATTAGCAATACGCTCGGTTCCTTAACGCTAAGTTGGGTCAAAGAAGATTACTGGCACAG CGCGCAGCAGATGGAATCCCTGAGCGCCAGCTACAACAATAGCTGGGGTCCGGTGAGCTATACGCTGAGCTACAGCTATA ACAAAAACACCTACCAGTACCGTTCGGACAATGACGATGATGACAACGACGACGATCGTTATAACCAGAACGATCGGCTG TTCACGCTGTCGCTGCACGTTCCGTTTACGGTGTTCGATTCCAGGCTATACGCCAGCTATATGCTGAACACGCGTAAGCA CGATGCCACGGTAAACAGCACCACCCTTAGCGGCACCGCGCTGCGTGACAGAAACCTGAACTGGTCGTTACAGCAAAGCC ACAGCACACAAGACGGTGATTCCGGCGGGGTAAACGCCAGCTATAAAGGCACTTATGCCAACCTCAACGCCGGTTACAAT CAGTCGCCAGATAGCCAACAAGTCAGCTACGGCATCAGCGGCGGCATTCTGGCGCACGAAAACGGTATTACCCTGAGCCA GCCGATTACCGGCGCGGCGATTTTAATTAAAGCGCCCGGCGCCAGCGGCGTTTCGGTTGAAAACCAGACCGGCGTCGCCA CCGACTTCCGGGGTTATACGGTGATCCCCAACGTCACGCCGTATTATCGCTACGATATCTCGCTCGACAGCAGCACGTTT GCTGACAACGTGGATATTCCGCTCAACAACCAGACCGTCTACCCGACGCGTAATGCGGTGGTGCGCGCGGCGTATGACAC GCATAAGGGCTATCGCGTGTTGTTAACGCTGACGCGCAGCAATGGCGAGCCCGTGCCCTTTGGCGCGACGGCAAGCGTCG ATGGGCAGGATGCGAACCTGGCCAGTATCGTCGGCGATAAAGGCCAGGTCTTCCTCAGCGGCCTGCCGGAAGAGGGCCTG CTGCTGGTGAACTGGGGAAGCGCCTCTTGCCGCGCGGATTACCGCCTGGATATCAGCAAAAATATGAACGGCATAGTGAT GGCGAACGCCGTCTGCCAGTGA Protein sequence : MCIALGSTFTHVAWARDYFNPAFIENHGQANRTSVDLSTFDNDKSQLPGTYYVTININKTEIGTRNVDFQLATLSDGQQA LQGCLRLQELKDNGVKTDLFPTLESEKGCVDLNVIPGASQRFDFQRQALSVSIPQLYIANNARGYVPPEKWQEGITALML NYSFSGYKEYGSSEDSDDAESKYLALQPGFNLGPWRFRNYSNWSSNNGESGSWNSVYNYLQRDIIALKSQFTAGDSNTPS DVFDSVPFRGLQLTSDDQMQPNSQRGYAPTIRGIARSNAQVIVRQNGYIAYQTAVSPGEFEINDMFPTGSNGDYDVTVKE ADGSEQHFIVPYSSLPILQRTGRAKYSVTVGKYRDYNNHTLDDFGQATLLYGLPWGITLYGGSQIAGDKYQSVAFGVGQN MQMLGAISLDSIWSHAKFDDGRKEIGQSWRVRYSKGVVSTGTTFSLAGYRYASENYNSLSEVINPDDDFYDNYGKRHNRF EASVNQQISNTLGSLTLSWVKEDYWHSAQQMESLSASYNNSWGPVSYTLSYSYNKNTYQYRSDNDDDDNDDDRYNQNDRL FTLSLHVPFTVFDSRLYASYMLNTRKHDATVNSTTLSGTALRDRNLNWSLQQSHSTQDGDSGGVNASYKGTYANLNAGYN QSPDSQQVSYGISGGILAHENGITLSQPITGAAILIKAPGASGVSVENQTGVATDFRGYTVIPNVTPYYRYDISLDSSTF ADNVDIPLNNQTVYPTRNAVVRAAYDTHKGYRVLLTLTRSNGEPVPFGATASVDGQDANLASIVGDKGQVFLSGLPEEGL LLVNWGSASCRADYRLDISKNMNGIVMANAVCQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 3e-125 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| stiC | YP_002635819.1 | fimbriae usher protein | VFG0454 | Protein | 3e-139 | 42 |
| stiC | YP_002635819.1 | fimbriae usher protein | VFG1645 | Protein | 2e-125 | 41 |
| stiC | YP_002635819.1 | fimbriae usher protein | VFG0912 | Protein | 2e-126 | 41 |
