Gene Information

Name : SPC_1566 (SPC_1566)
Accession : YP_002637156.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1637700 - 1638116 bp
Length : 417 bp
Strand : +
Note : -

DNA sequence :
ATGTATTCAAGAGCCGATCGCTTATTAAGACAGTTTTCACTAAAATTAAATACCGATTCAATTGTCTTTGACGAAAACAG
ATTATGCTCATTTATTATAGATAACCGTTACCGTATCTTACTAACAAGCACTAACAGTGAGTATATAATGATATACGGTT
TTTGCGGAAGACCTCCGGATAATAATAATCTTGCTTTTGAATTTCTCAATGCTAATTTATGGTTTGCAGAGAATAATGGA
CCACATTTGTGTTATGATAATAACTCACAATCATTATTATTGGCTCTCAACTTCTCACTAAATGAAAGTTCTGTAGAGAA
ACTTGAATGTGAAATTGAGGTAGTTATTAGATCAATGGAGAATCTGTATCACATTTTACAGGATAAAGGAATAACTCTGG
ATACCGATTATACGTGA

Protein sequence :
MYSRADRLLRQFSLKLNTDSIVFDENRLCSFIIDNRYRILLTSTNSEYIMIYGFCGRPPDNNNLAFEFLNANLWFAENNG
PHLCYDNNSQSLLLALNFSLNESSVEKLECEIEVVIRSMENLYHILQDKGITLDTDYT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cesT CAI43866.1 CesT protein Virulence LEE Protein 4e-29 60
cesT YP_003232161.1 T3SS chaperone CesT Virulence LEE Protein 6e-29 60
Z5111 NP_290260.1 hypothetical protein Not tested LEE Protein 5e-29 60
orfU AAC38391.1 OrfU Not tested LEE Protein 4e-29 60
ECs4560 NP_312587.1 protein CesT Virulence LEE Protein 5e-29 60
unnamed AAC31505.1 L0026 Not tested LEE Protein 4e-29 60
unnamed ACU09450.1 putative factor Tir chaperone Virulence LEE Protein 4e-29 60
cesT AAK26723.1 CesT Virulence LEE Protein 4e-29 60
cesT AAL57550.1 CesT Virulence LEE Protein 4e-29 60
cesT CAC81870.1 CesT protein Virulence LEE II Protein 4e-29 60
cesT YP_003223467.1 chaperone CesT Not tested LEE Protein 6e-29 60
unnamed AAL06377.1 CesT Virulence LEE Protein 4e-29 59
cesT YP_003236080.1 putative chaperone CesT Not tested LEE Protein 7e-29 59
cesT AFO66323.1 putative chaperone Not tested SESS LEE Protein 2e-27 59
cesT AFO66393.1 putative chaperone Not tested SESS LEE Protein 2e-27 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPC_1566 YP_002637156.1 hypothetical protein VFG0804 Protein 1e-29 60
SPC_1566 YP_002637156.1 hypothetical protein VFG0738 Protein 2e-29 60