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Name : pdhD (Sca_0722) Accession : YP_002633817.1 Strain : Staphylococcus carnosus TM300 Genome accession: NC_012121 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 724883 - 726289 bp Length : 1407 bp Strand : + Note : E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGGTAGTTGGTGATTTTCCAATTGAAACAGATACTATTGTAATCGGAGCAGGTCCTGGGGGTTATGTTGCAGCAATCCG CGCAGCACAATTAGGACAAAAAGTTACAATCGTTGAGAAAGGCGAATTAGGCGGTGTATGTCTTAACGTAGGATGTATCC CATCTAAAGCATTATTGCACGTTTCACACGTATTCCAAGAAGCACAACATTCAGATAATTTAGGTATTATCGCTAAAGAT GTTGAACTTAAATTTGACAAAGTTCAAGACTTCAAAAAATCTGTTGTTAATAAATTAACTGGCGGTGTTGAAGGATTATT AAAAGGAAACAAAGTTGAAATTGTAAAAGGTGAAGCTTACTTCCACGACAGCAACAGCTTACGTGTTATGGATGAAAAAA GTGCTCAAACTTACAACTTCAAAAATGCAATCATTGCTACAGGTTCTAGACCAATTGAAATTCCTAATTTCAAATTCGGC GAACGTGTTATCGACTCAACAGGTGCTTTAAACTTACAAGAAGCTCCTAAAAAATTAGTCGTAGTAGGCGGCGGTTACAT TGGTTCTGAATTAGGTACAGCATTTGCGAACTTCGGTACAGAAGTTACTATTTTGGAAGGTGCCAAAGATATCTTAGGCG GTTTCGAAAAACAAATGACACAACCTGTTAAGAAAAAAATGAAAGAAAAAGGTATCGAAATCGTTACTGAAGCAATGGCT AAATCTGCTGAAGAAACTGCAGACGGTGTTAAAGTAACTTACGAAGCTAAAGGCGAAGAAAAATCAATCGAAGCTGATTA CGTTTTAGTTACAGTTGGACGTCGTCCAAACACTGATGAAATGGGTCTTGAAGAATTAGGACTTAAATTTGCAGACCGCG GATTATTAGAAGTTGACGATCAAAGCCGTACTTCTATTAAAAACATTTTTGCTATCGGCGATATCGTTCCTGGTTTACCA CTTGCACATAAAGCAAGTTATGAAGGTAAAGTTGCTGCTGAAGCAATTTCAGGTGAAAAATCTGCAGTAGATTACATTGG TATGCCTGCTGTATGTTTCACTGAACCAGAATTAGCAACTGTAGGTTATAACGAAGCTCAAGCTAAAGAAGAAGGCTTGG ATTACAAAGCTTCTAAATTCCCTTACGCTGCTAATGGTCGTGCCTTATCATTAGATGATACTACTGGATTTGTTAAATTG TTAACACTTAAAGAAGATGGTACTTTAATCGGCGCACAAGTTGTAGGTACTGGTGCTTCTGATATCATCGCTGAATTAGG TTTAGCTATCGAATCTGGTATGAACGCTGAAGATATCGCATTAACAGTACATGCTCACCCAACTTTAGGTGAAATGAGCA TGGAAGCTGCTGAAAAAGCAATCGGATTACCAATCCACACTATGTAA Protein sequence : MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGELGGVCLNVGCIPSKALLHVSHVFQEAQHSDNLGIIAKD VELKFDKVQDFKKSVVNKLTGGVEGLLKGNKVEIVKGEAYFHDSNSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFKFG ERVIDSTGALNLQEAPKKLVVVGGGYIGSELGTAFANFGTEVTILEGAKDILGGFEKQMTQPVKKKMKEKGIEIVTEAMA KSAEETADGVKVTYEAKGEEKSIEADYVLVTVGRRPNTDEMGLEELGLKFADRGLLEVDDQSRTSIKNIFAIGDIVPGLP LAHKASYEGKVAAEAISGEKSAVDYIGMPAVCFTEPELATVGYNEAQAKEEGLDYKASKFPYAANGRALSLDDTTGFVKL LTLKEDGTLIGAQVVGTGASDIIAELGLAIESGMNAEDIALTVHAHPTLGEMSMEAAEKAIGLPIHTM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 9e-107 | 49 |
