Gene Information

Name : arsB (Sca_0671)
Accession : YP_002633767.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Resistance
Product : arsenic efflux pump protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 675290 - 676579 bp
Length : 1290 bp
Strand : -
Note : (P74985) Arsenical pump membrane protein (Arsenic efflux pump protein),InterPro: Arsenical pump membrane protein; Hypothetical protein

DNA sequence :
ATGGCAATGATTGCACTTATTATTTTTATAATGACACTTATTTTTATAATATGGCAGCCCAAAGGATTAGACGTTGGCAT
TACAGCAATTATTGGAGCCTTACTTGCCTTAATAACAGGTGTGGTTTCTATTCATGATTTAGGTGAAGTGACACAAATTG
TCTGGAACGCTACCCTTACATTTGTCGCATTAATTATCATTTCACTTATTTTAGATGAAATCGGTTTTTTCGAATGGGCA
GCTCTTCATATGGTTCGTGCTTCAAAAGGTAATGGTATCCGTATGTTTATTTATATCATACTTTTAGGTGCCTTAATTGC
AGCTTTATTTGCAAATGACGGTGCAGCTTTAATACTGACGCCTATTGTCCTTGCTATGGTAAGACATCTCAACTTCAATA
AAAGGTATATATTCCCATTTATTATTGCTTGTGGATTTATTGCAGATACAACCTCATTACCTTTAATTGTAAGTAACTTA
GTTAATATTGTATCCGCGGATTATTTCAACATTAATTTTATTGAGTATTTCCTCAAAATGATAATCCCAAATCTATTTTC
TTTAATCGCAAGTATTTTAATTTTATTTCTTTATTTTCATAAAAGTATTCCTGACACTGTGGATATTTCAAAGTTATCCC
CTCCCGAAAGCGCGATTAAAGACACACAATTATTTAAATTATCTTGGTTAGTTATCATTTTATTACTCAGTGGTTATCTT
ATAAGTGAGTTCACAGGTATTCCGGTTTCTATTATTGCAGGCATTATAGCACTAGTTTTCCTTTTATTAGCGAAAAAATC
AAAAGCTGTAAATACTAAAGAAGTTATTAAAGGGGCACCATGGAATATTGTTGTATTTTCAATTGGAATGTATCTTGTTG
TTTTCGGATTAAAAAATGCAGGCATTACGACACTACTATCAGAGATCATAAATCAAATTTCGCAATTTGGTTTATTTTCA
AGCGTAATCGGTATGGGCTTCTTATCTGCAATTTTATCTGCAATTATGAATAATATGCCTACAGTCATGATAGATGCTAT
AGCTATTAACCAAGCACATGCTTCCGGATTAATTAAAGAGGCACTTGTATATGCAAACATAATCGGCGCTGATTTAGGGC
CTAAACTTACCCCTATCGGTTCTCTAGCAACTTTATTGTGGCTTCATGTTCTTTCACAAAAAGGCATGAAAATTTCATGG
GGCGTTTATTTTAAAACAGGAGTTATTATTACCATACCTGTCTTACTCGCAACATTGATAGGATTATATATATCGATGTT
ATTATTTTAA

Protein sequence :
MAMIALIIFIMTLIFIIWQPKGLDVGITAIIGALLALITGVVSIHDLGEVTQIVWNATLTFVALIIISLILDEIGFFEWA
ALHMVRASKGNGIRMFIYIILLGALIAALFANDGAALILTPIVLAMVRHLNFNKRYIFPFIIACGFIADTTSLPLIVSNL
VNIVSADYFNINFIEYFLKMIIPNLFSLIASILILFLYFHKSIPDTVDISKLSPPESAIKDTQLFKLSWLVIILLLSGYL
ISEFTGIPVSIIAGIIALVFLLLAKKSKAVNTKEVIKGAPWNIVVFSIGMYLVVFGLKNAGITTLLSEIINQISQFGLFS
SVIGMGFLSAILSAIMNNMPTVMIDAIAINQAHASGLIKEALVYANIIGADLGPKLTPIGSLATLLWLHVLSQKGMKISW
GVYFKTGVIITIPVLLATLIGLYISMLLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-124 75
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 8e-123 75
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 5e-130 75
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 8e-95 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_002633767.1 arsenic efflux pump protein BAC0575 Protein 1e-131 76
arsB YP_002633767.1 arsenic efflux pump protein BAC0574 Protein 4e-127 76
arsB YP_002633767.1 arsenic efflux pump protein BAC0577 Protein 4e-95 59
arsB YP_002633767.1 arsenic efflux pump protein BAC0576 Protein 6e-93 59
arsB YP_002633767.1 arsenic efflux pump protein BAC0031 Protein 3e-92 58
arsB YP_002633767.1 arsenic efflux pump protein BAC0578 Protein 1e-93 58