Gene Information

Name : Sca_0538 (Sca_0538)
Accession : YP_002633637.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Resistance
Product : putative cation exporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 534521 - 536569 bp
Length : 2049 bp
Strand : +
Note : (P05425) Probable copper exporting ATPase B (EC 3.6.3.4),InterPro: Copper-translocating P-type ATPase; Hypothetical protein

DNA sequence : 
ATGACTCAAAATCAAAACTCAAGTCATACACATGAAAGTTCTCATGTGCATAATCATCATGGAATGCATCATCAAAATCA
TATGGGGCACCATCATCATGGTAATTTTAAGAAGAAATTTTTTATCTCATTAATCTTTGCACTTCCTATTATTATATTAT
CTCCAATGATGGGTTTGCACTTGCCGTTTCAGTTTACATTTAAAGGATCTGATTGGATTGTTTTAATACTTGCTACCATA
CTTTTCGTTTATGGCGGCCAACCATTCTTATCAGGTGCTAAGGATGAGTTGAAAGAGAAAAAACCAGGCATGATGACGCT
TATTGCTTTAGGTATAACTGTTGCATATGTATATAGTCTATATGCATTCTATCTTAATCATTTTAGTAATACTTCTTCTC
ATGCTATGGACTTTTTCTGGGAGTTAGCAACTTTAATTATTATCATGCTATTAGGTCATTGGATTGAGATGAATGCTGTT
GGCAACGCAGGAAATGCTTTAGAGAAAATGGCAGCATTGTTACCTAATAAAGCGATTAAAGTGAATAAAGACGGTAACCA
TGAAACGATTCAAACTTCTGATATAAAGGATGGGGACATCATTGAAGTCAAATCAGGGGATAGCATACCCGCAGATGGTA
TCATTATCAAAGGTAATACTGATGTAGATGAATCATTGGTAACAGGCGAATCAAAGAAAGTTCCAAAACATATTGATGAC
AAGGTTATTGGCGGTGCGATTAATGGCTCGGGTACTATTCAAGTGAAAGTCTCTGCTGCAGGCGGTAAAGGTTATTTATC
ACAAGTGATGGATATGGTGAGTCAAGCACAAGATGATAAATCAAAAGCAGAGCTTTTATCTGATAAAGTTGCAGGATACC
TCTTTTATTTTACGGTAAGTGCAGGTCTTATTGCTTTTATAGTATGGGTTTTGATTACGCATAATATAGATTTCGCACTT
GAGAGATTGGTAACGGTTTTAGTAATAGCTTGTCCGCATGCATTGGGTTTAGCTATACCATTAGTTACTGCACGTTCTAC
TTCAATTGGTGCCCACAATGGTCTTATTATTAAAAATAGAGAAGCTGTAGAGATTGCGCAGCCTTTAAACTATGTCATGA
TGGATAAAACAGGTACTTTAACTAAAGGTGTTTTTACAGTTAATCACTATGAAAGTCTAGATAGTCAATTATCAGATGAC
GAAGTATTGCAATTGTTTGCTTCATTAGAAAGTGCTTCTAATCATCCGCTAGCACGTGGAATAATTGAATACGCGAAATC
TAAGGATACTAAAGTTGAAAACTCGGAGGATGTTCAGACGATTTCAGGTGTTGGATTAGAAGGAAAAGTGAATGGACACA
GTTTTAAGATTGTTAATGAATCGTATTTGAAAAAGCATCAGTTTAAATATGATGTTTCATTATTTACTCATTGGGCACAA
AAAGGTAATTCAATCAGCTATTTGATTGAAGGTGATTCCGTTGTTGGTTTTATTGCTCAAGGTGATCAAATCAAAGAAAG
CTCAAAACAAATGGTTTCAGATTTGATAGAACGAAAAATTACACCTGTGATGTTGACAGGGGATAATAAAGAAGTAGCTG
AAAATGTTGCGAAAGAATTAGGAATTAAATATGTACATTCTGAATTATTACCAGAAGACAAAGAAACAATTATACAAAAT
TATCAAAAAGACGGCAGTAAAGTTATGATGGTGGGAGACGGCATTAATGATGCGCCAAGTTTAGTTAGAGCAGATATTGG
TGCAGCAATTGGTGCAGGTACGGATGTTGCAATAGATTCTGCTGATATTATCATCGTCAAAAGTAATCCTATTGATATCA
TTCATTTCCTTACGCTATCTAAAAATACAATGCGTAAAATGGTCCAAAACCTTTGGTGGGGTGCTGGATATAATATTATT
GCAGTACCTCTAGCAGCTGGTGTGTTAGCATTTGCAGGTTTGATATTATCTCCAGCAGTAGGGGCAATTCTAATGTCACT
CAGTACTATAATTGTAGCAATCAATGCATTTACACTAAAATTAGATTGA

Protein sequence : 
MTQNQNSSHTHESSHVHNHHGMHHQNHMGHHHHGNFKKKFFISLIFALPIIILSPMMGLHLPFQFTFKGSDWIVLILATI
LFVYGGQPFLSGAKDELKEKKPGMMTLIALGITVAYVYSLYAFYLNHFSNTSSHAMDFFWELATLIIIMLLGHWIEMNAV
GNAGNALEKMAALLPNKAIKVNKDGNHETIQTSDIKDGDIIEVKSGDSIPADGIIIKGNTDVDESLVTGESKKVPKHIDD
KVIGGAINGSGTIQVKVSAAGGKGYLSQVMDMVSQAQDDKSKAELLSDKVAGYLFYFTVSAGLIAFIVWVLITHNIDFAL
ERLVTVLVIACPHALGLAIPLVTARSTSIGAHNGLIIKNREAVEIAQPLNYVMMDKTGTLTKGVFTVNHYESLDSQLSDD
EVLQLFASLESASNHPLARGIIEYAKSKDTKVENSEDVQTISGVGLEGKVNGHSFKIVNESYLKKHQFKYDVSLFTHWAQ
KGNSISYLIEGDSVVGFIAQGDQIKESSKQMVSDLIERKITPVMLTGDNKEVAENVAKELGIKYVHSELLPEDKETIIQN
YQKDGSKVMMVGDGINDAPSLVRADIGAAIGAGTDVAIDSADIIIVKSNPIDIIHFLTLSKNTMRKMVQNLWWGAGYNII
AVPLAAGVLAFAGLILSPAVGAILMSLSTIIVAINAFTLKLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 7e-178 75

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sca_0538 YP_002633637.1 putative cation exporting ATPase BAC0079 Protein 9e-177 59
Sca_0538 YP_002633637.1 putative cation exporting ATPase BAC0383 Protein 8e-140 49
Sca_0538 YP_002633637.1 putative cation exporting ATPase BAC0629 Protein 9e-115 46