Gene Information

Name : Sca_0518 (Sca_0518)
Accession : YP_002633617.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Unknown
Product : putative amidase, phage associated
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0860
EC number : 3.5.1.28
Position : 515121 - 516524 bp
Length : 1404 bp
Strand : +
Note : (P54525) Hypothetical protein yqiI,InterPro: CHAP,Sca-Prophage; Hypothetical protein

DNA sequence :
ATGACATCAATTAGAACATATAAACAAGCGATTAGTTATTTAAAATCAATGGAGGGACATGCGTATAATCCCGATAACGC
ATATGGTGTTCAGTGTTTTGATCTAGCCAACCAATATTGGCTTTATTTATTCAATCACGGCTTAAAAGGTGTGGGTGCTG
CAGACATACCAACATGGAATAACTTCACAAATGAGGCGACTGTATATGAAAATACACAATCGTTCCAAGCGTTACCAGGC
GATGTTGTGATATTCAATCGTAATTATGGAGAAGGTTATGGACATGTAGGTATCGTATTAAAAGCTACTTTAAATTCAAT
TACGATACTTGAGCAAAACTGGTTGGGTGGTGCTTATTGGACGCCTCCAGAAGTAGCTACACGCCGTACACATGGATATG
ATTTCCCAATGTGGTTTATCCGTCCATTCTACGCTAAATCAACTAAACTTAACGCGGTTAAAAGTAAATCTAAACCAGCT
AGGAAAGCTAAAGCGAACAAAGGTAAAAAGATTATGCTTGTCGCCGGTCATGGTAAAGGAGCATATTCAAATGATCCTGG
TGCCGTTGCAAATGGATATAATGAACGTGACTTTAATCGTAAAAATATCATTCCTAGAGTTAAAAAGTATCTTGAAAGTG
TAGGGCATACCGTTGTCTTATATGGTGGTAAAACAATGAATCAAGATTTATATCAAGATACACGCTATGGACAACAAGTT
GGGAACTACTCAGATTATGGATTGTATTGGGTTAAAAAGAACGTAAAACCTGATATTATTGTAGAGTTCCATTTAGACGC
AGCAAGCCCACAAGCAAGTGGCGGTCATGTAATTATTAGTGATAGATACCCAGCCGATGATATAGACAAAGCCTTATCTA
GTGCATTAGGTAAAACGGTTGGTAAAATCAGAGGTGTTACACCTAGAAACGATTTGTTAAACGCTAATGTAACAGGTCGA
TTAAATTTAAACTATAGATTAATAGAACTTGGTTTCATTACAAGTAAACATGATATGAATTACATTACAAATAATTTAGA
TAGTTTCACTAAACGAATTGCAGAGGCAATTAATGGTAGACAAATCGGCGCTAAAGCTAGTAAACCTAAAGAAAAACAAA
CTGTATGGAATTGGAAAGGCAAGTTTACTGCAGACAGAACAATTAAAGTTAGAAAATCTCCAGGATTAAACGGTACAGAA
GTCGAACCTAGATCATGGTTAAAAAATGGTAATTACGTTCCATTTGACCAAGTCATCAAAAAAGATGGTCATTGGTGGGT
TCGTTTCAAATATGTGCAACCCGGTTCAAGCGACAAAGATTTCTATTGTGCAGTTTGTAAAATCACTGATAAAGAACAGA
AGATTAAAAATGAAAAATACTGGGGCGAAATTGTTTGGAAGTAA

Protein sequence :
MTSIRTYKQAISYLKSMEGHAYNPDNAYGVQCFDLANQYWLYLFNHGLKGVGAADIPTWNNFTNEATVYENTQSFQALPG
DVVIFNRNYGEGYGHVGIVLKATLNSITILEQNWLGGAYWTPPEVATRRTHGYDFPMWFIRPFYAKSTKLNAVKSKSKPA
RKAKANKGKKIMLVAGHGKGAYSNDPGAVANGYNERDFNRKNIIPRVKKYLESVGHTVVLYGGKTMNQDLYQDTRYGQQV
GNYSDYGLYWVKKNVKPDIIVEFHLDAASPQASGGHVIISDRYPADDIDKALSSALGKTVGKIRGVTPRNDLLNANVTGR
LNLNYRLIELGFITSKHDMNYITNNLDSFTKRIAEAINGRQIGAKASKPKEKQTVWNWKGKFTADRTIKVRKSPGLNGTE
VEPRSWLKNGNYVPFDQVIKKDGHWWVRFKYVQPGSSDKDFYCAVCKITDKEQKIKNEKYWGEIVWK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1748 YP_253663.1 amidase Not tested ¥ÕSh1 Protein 9e-161 78
SAOV_0342 YP_005735859.1 prophage amidase, putative Not tested ¥ÕSa1 Protein 3e-60 49
ytA NP_646197.1 truncated amidase Not tested ¥ÕSa2 Protein 8e-61 49
SAUSA300_1383 YP_494080.1 phiSLT ORF484-like protein, lysin Not tested ¥ÕSa2 Protein 4e-61 49