Gene Information

Name : Sca_0517 (Sca_0517)
Accession : YP_002633616.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Virulence
Product : putative holin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 514858 - 515121 bp
Length : 264 bp
Strand : +
Note : (Q99165) Hypothetical 9.5 kDa protein in ORF3 5region,InterPro: Holin SPP1,Sca-Prophage; Hypothetical protein

DNA sequence :
ATGGATACAGGAACAATTGTAAGAACAATTTTATTAATACTAGCATGGGTTAACCAAGCTTTAGCTTTAAATCACATTTC
GCCAATACCGGTCGATGAAGTGACAATCAGTACATTAATTACTGGTGTTGTATCTCTTTGGACGTGGTGGAAAAACAACA
ATTTCACTCATCATGCCCAAAAAGGCCAAAAAGTAATCAAACAATCTAAAGCAGGCACTTACTCAACAGGTGGCGCCCCT
CAAATGAATGGAGATGAATTCTAA

Protein sequence :
MDTGTIVRTILLILAWVNQALALNHISPIPVDEVTISTLITGVVSLWTWWKNNNFTHHAQKGQKVIKQSKAGTYSTGGAP
QMNGDEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1749 YP_253664.1 holin Virulence ¥ÕSh1 Protein 3e-21 70
MW1381 NP_646198.1 holin Virulence ¥ÕSa2 Protein 2e-08 47
SAOV_0341 YP_005735858.1 phage holin Not tested ¥ÕSa1 Protein 2e-08 46
SAUSA300_1384 YP_494081.1 phiSLT ORF100b-like protein, holin Not tested ¥ÕSa2 Protein 2e-08 46