Gene Information

Name : Sca_0494 (Sca_0494)
Accession : YP_002633593.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Unknown
Product : putative phage portal protein
Function : -
COG functional category : S : Function unknown
COG ID : COG4695
EC number : -
Position : 492643 - 493815 bp
Length : 1173 bp
Strand : +
Note : InterPro: Phage portal protein,Sca-Prophage; Hypothetical protein

DNA sequence :
ATGGCTGGATTATTTGATAAGATTTTCGGCAGACATGAAGAAGCAAGCTGGATGTATGATTTGGAATTGTTTCAAGATAC
ATCTGAAAAAGCTTATTTGAAACAAGCAGCATTGAATACTTGTATTGAATTTTTAGCAAGAACTCTTTCACAATCAGAGT
TTCGATTTTTAGACGCTGATAATAAGTCTTTAAAAGACCAATCCTGGTACAAATTGAATGTTAGACCGAATACAGATTTA
TCTTCAACAGATTTTTGGCAGAAAGTTATCTACAAATTGATTTATGACAATGAAGTGTTGATTGTCGTGACAGATACCAA
AGATTTAGTAGTGGCAGACAATTATAATCGTAAAAAATATGCGCTGTATCCCGATATTTTCGAAGATGTAACAGTAAGCG
ATTATGAATTTGAACGTTCATTTAATATGGACGAGGTTATTTACTTAACTTACAACAATGACAAACTGAATAAATTTACT
GAAGGCTTATTTGCAGACTATGGAGAGATATTCGGACGTATGATAAGCGCTCAAATGCGTAATTATCAGATACGAGGCAT
CATGAATGTTGATTCCAGTGCAGTCAACGGCGAAAAGAATACAGAAAAAATGCAAAACTATGTCGATAAAGTCGTTAATT
CATTCAGTAACAATGGAGTAGCAGTTGCGCCATTAACAAAAGGGTTTGACTATCAAGATGTATCTTCTGCATCTAAATCA
AACAATGCACCTTTTGATGAATTGGGCAAGCTTTTCAGGTCATTAATTGATATTGTGGCTAAAGCAATCGGTATCCCTCC
CTCTCTTATTCATGGAGAGATGGCGGATTTGGATAATGCGATGAAATCGTACATTAAATTCTGTATCAAGCCTTTGATTA
AGAAGATTGAAGATGAATTGAACGCTAAATTGTTGAAACAAAATGAAGTTATCAAAGGCAAACGGATTAAAGTTATCGGC
ATCGATAAGAAAGACCCGTTAGAAATGGCTGAATCAATCGACAAACTTGTATCTTCAAGCACGTTCACACCGAACCAAGT
ATTAGTGATGTTAGGTGAGGAACCGTCAGACGACCCTCAAATGGATCAATACTTTGTAACTAAGAACTATACAACAACAA
GAGAAGAAACTGCGGATAGCACACCAGAAGGAGGTGAAACTGATGAAGATTAA

Protein sequence :
MAGLFDKIFGRHEEASWMYDLELFQDTSEKAYLKQAALNTCIEFLARTLSQSEFRFLDADNKSLKDQSWYKLNVRPNTDL
SSTDFWQKVIYKLIYDNEVLIVVTDTKDLVVADNYNRKKYALYPDIFEDVTVSDYEFERSFNMDEVIYLTYNNDKLNKFT
EGLFADYGEIFGRMISAQMRNYQIRGIMNVDSSAVNGEKNTEKMQNYVDKVVNSFSNNGVAVAPLTKGFDYQDVSSASKS
NNAPFDELGKLFRSLIDIVAKAIGIPPSLIHGEMADLDNAMKSYIKFCIKPLIKKIEDELNAKLLKQNEVIKGKRIKVIG
IDKKDPLEMAESIDKLVSSSTFTPNQVLVMLGEEPSDDPQMDQYFVTKNYTTTREETADSTPEGGETDED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1102 YP_005736597.1 Portal protein, phage associated Not tested ¥ÕSa2 Protein 1e-100 54
SAUSA300_1940 YP_494591.1 phage portal protein Not tested ¥ÕSa3 Protein 9e-101 54
SAUSA300_1940 YP_494591.1 phage portal protein Not tested ¥ÕSa3 Protein 9e-101 54
SAKOR_01944 YP_008492132.1 Portal protein Not tested ¥ÕSa3 Protein 9e-101 54
SAV1965 NP_372489.1 hypothetical protein Not tested ¥ÕSa3 Protein 9e-101 54
SA1776 NP_375074.1 hypothetical protein Not tested ¥ÕSa3 Protein 9e-101 54
SH1774 YP_253689.1 hypothetical protein Not tested ¥ÕSh1 Protein 3e-83 50