Gene Information

Name : Sca_0493 (Sca_0493)
Accession : YP_002633592.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Unknown
Product : putative phage terminase, large subunit
Function : -
COG functional category : R : General function prediction only
COG ID : COG4626
EC number : -
Position : 490988 - 492628 bp
Length : 1641 bp
Strand : +
Note : (P59217) Putative terminase large subunit,InterPro: Phage Terminase,Sca-Prophage; Hypothetical protein

DNA sequence :
ATGATTAAGAATAAGTATATTGATGACTATATCCGTTTATGGAAAACAGGCAAAATATTGCTTAACAAAGAACGGATTAT
GCTTATTGCATATCTTGAAAGAGATGTACTTAGTCGTGGTGACTTATATTTTGATGAAGAACAAATTGAAAACTTTATCA
AATTTACTGAGAAGTGGTACTTCCCACTGCAACCATTCCAAAAGTTTATAGTACCATTTATATTTCTGTTCGAAAAAGAA
GGGAACTTCCTATATTTCGAGCAGTTTTTTATTACGTTAGGTCGTGGCGGAGGTAAAAACGGATTTATTACAGCGCTGTC
GAATTACTTTATCAGCTATCTGCATGGTATTCCTAATTACGATATTTCTGTAGTAGCCAATTCAGAGGACCAAGCTAAAA
CGTCATTTGAAGAAGCTTATAACATGATTGAACGTAACGAATTGGAAGATATGTTCTATCTGACTAAGTTGGTAATCACT
GACACAGAAACTAAATCACGTTTCAGATTCAGAACTTCGAATGCTGGTACAAAAGATGGTGGTCGTGAAGGTTGTGTCAT
TTATGACGAAGTACATAGATACGAAGATAGCGAAACAGTAGATGTGTTCAGTTCTGGATTAGGTAAAGTCAGAAATCCAC
GTGAATTTTTTATCGGTACAGACGGTTATGTGCGTGAGGGCTTCTTAGACAAATTGAAAGAACGTTCACTTTCTTTGCTT
AAAGGCGAAACACCAGACGATAGAATTTTCCCGTTCATTTGCAAGTTGGATGACCCTAAGGAAGTTGATGATCCAACGAT
GTGGGAGAAAGCTAATCCGATGTTCAGTGAGCCGATGTGCGAATATGCACAAGGTTTATTCAGAAAAGTTAAAAACCAAT
ACAATGAAATGACTTTTGCGCCATCTAAACGTGAAGAATTTATGACTAAGCGTATGAATCTTCCTGAAGTAGATTTAGAA
AAAGTTGTAGCACCATGGGAAGAAATTTTAGCGACAAACAGACCATTTCCTGAGTTGGAACAAAGACAATGCTTAGGCGG
TTTGGATTATGCAAGTATCAAAGACTTTGCAGCAGTCGGATTGCTTTTCAGAGAGGGCGATGACTACATTTGGAAGTCAC
ATTCATTTGTACGTAAAGGCTTTTTAGACAAAGTGAAATTGAAAGCACCTATTCATGAGTGGGAGAAAGAGGGATTACTC
ACAATTGTAGATGAACCTTCTATCAATCCACTTCATATTGTCTTATGGTTCGATAAAATGCGAGAAACATACGGATTAGA
AAAAGTGATTGCTGATAATTTCAGAATGGATCTATTAAGACCACTATTTGAAGAATACGGAATAGAAATTGAAGTGATTA
GAAATCCTAGAGCCATACAATCATTGTTAGCACCTCGAATTGAAACCATGTTTGCTAACCATAATGTCATATTCGATGAC
AATCCTATGATGCGTTGGTACACAAATAACGTTGCTGTCAAAATCAAACCGGATGGCAACAAAGAATATATCAAGAAAGA
TGAGATTAGACGTAAAACAGACGGGTTCCAAGCATTTATTCACGCTTTATACAGAGCAGACGATTTATTGGAAGCGGACG
TCAGTTCGAGTCTTGACTTCTTGAACGCAATTGACTTTTAG

Protein sequence :
MIKNKYIDDYIRLWKTGKILLNKERIMLIAYLERDVLSRGDLYFDEEQIENFIKFTEKWYFPLQPFQKFIVPFIFLFEKE
GNFLYFEQFFITLGRGGGKNGFITALSNYFISYLHGIPNYDISVVANSEDQAKTSFEEAYNMIERNELEDMFYLTKLVIT
DTETKSRFRFRTSNAGTKDGGREGCVIYDEVHRYEDSETVDVFSSGLGKVRNPREFFIGTDGYVREGFLDKLKERSLSLL
KGETPDDRIFPFICKLDDPKEVDDPTMWEKANPMFSEPMCEYAQGLFRKVKNQYNEMTFAPSKREEFMTKRMNLPEVDLE
KVVAPWEEILATNRPFPELEQRQCLGGLDYASIKDFAAVGLLFREGDDYIWKSHSFVRKGFLDKVKLKAPIHEWEKEGLL
TIVDEPSINPLHIVLWFDKMRETYGLEKVIADNFRMDLLRPLFEEYGIEIEVIRNPRAIQSLLAPRIETMFANHNVIFDD
NPMMRWYTNNVAVKIKPDGNKEYIKKDEIRRKTDGFQAFIHALYRADDLLEADVSSSLDFLNAIDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1775 YP_253690.1 hypothetical protein Not tested ¥ÕSh1 Protein 0.0 63
SA1777 NP_375075.1 hypothetical protein Not tested ¥ÕSa3 Protein 1e-166 61
SAUSA300_1941 YP_494592.1 phi77 ORF003-like protein, phage terminase, large subunit Not tested ¥ÕSa3 Protein 1e-166 61
SAUSA300_1941 YP_494592.1 phi77 ORF003-like protein, phage terminase, large subunit Not tested ¥ÕSa3 Protein 1e-166 61
SAOV_1101 YP_005736596.1 Phage terminase large subunit Not tested ¥ÕSa2 Protein 2e-166 61
SAKOR_01945 YP_008492133.1 Terminase large subunit Not tested ¥ÕSa3 Protein 1e-166 61
SAV1966 NP_372490.1 phage terminase large subunit Not tested ¥ÕSa3 Protein 1e-166 61