Gene Information

Name : ssb (Sca_0475)
Accession : YP_002633574.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Unknown
Product : putative single strand DNA binding protein,phage associated
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 481256 - 481687 bp
Length : 432 bp
Strand : +
Note : (Q932A8) Single-strand binding protein 1 (SSB 1) (Helix-destabilizing protein 1),InterPro: Single-strand binding protein,Sca-prophage; Hypothetical protein

DNA sequence :
ATGATTAACAGAGTCGTATTAGTAGGTCGTTTAACAAAAGATCCAGAATTCAGAACAACCCCGAGCGGTGTAGATGTAGC
AACATTCACACTAGCAGTCAACCGTAATTTTAAGAGTAAAAATGGAGAGCAACAGGCGGACTTTATCAACTGTGTTGTAT
TCCGTAAACAAGCAGAAAACGTCAATAATTATTTGAATAAAGGCAGTTTAGCAGGTGTCGATGGTCGCTTACAATCACGC
AGCTATGAAAATAAGGAAGGACAACGTGTGTTTGTAACCGAAGTAGTAGCAGATAGTGTTCAATTCTTAGAGCCAAAGAA
TAACAATCAACAAAACAATCAACCTCAACAACAACAAGGGCAAGCACCAGCAGGCAATAACCCGTTTGGAAATGCTAGCG
ACGATATTTCAGAATCGGAACTCCCTTTCTAG

Protein sequence :
MINRVVLVGRLTKDPEFRTTPSGVDVATFTLAVNRNFKSKNGEQQADFINCVVFRKQAENVNNYLNKGSLAGVDGRLQSR
SYENKEGQRVFVTEVVADSVQFLEPKNNNQQNNQPQQQQGQAPAGNNPFGNASDDISESELPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 8e-41 83
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 3e-38 82
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 4e-40 78
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 5e-39 75
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-38 73
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 4e-30 69
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 4e-21 48
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 6e-21 48
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 3e-20 43