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Name : Sca_0436 (Sca_0436) Accession : YP_002633535.1 Strain : Staphylococcus carnosus TM300 Genome accession: NC_012121 Putative virulence/resistance : Virulence Product : superantigen-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 452697 - 453425 bp Length : 729 bp Strand : - Note : these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation DNA sequence : ATGAAAAAACAAATTATCAAAAAAGTGATTCTATCAACAAGCATTACACTTATGGGTCTTGGAGCTGTCAGTACTTTCAA TTCAGATCCTTCACTATCTTCACAAGTACATGCAGCCCAATTCCAAGGTCAAAATCAAGCTGACGAATTAAAAAAATATT ATTCACAAACTCCAGAAATATTTTCTAACAAAAAATTAACACAAGTTGAAGAAGGCTCTGATAAAGGAAAGATTTATGTA AAAATTCAAAGCTCATGGGGTGCTTTTATCAACGTAATAGGCAATCAAAGTTGGGGGAATGTTAATAAATTACGCGGCAA ACAAGTTGATGTTTTCGGTATTAAAGATAAACCAACTTCTCAATACTGGTGGGCATATACTGAATATTTCACAGGCGGTG TCACACCAGCTGCTAATCCTAGCGCACCAGTCTACCCGATCAAAGTAACAGTTAAGAAAAATGCGCATGTTAAAAGTTCT TTTGATATTAAAGCATTTGAAACTCGAAAAGACAAAATCACTTTGAAAGAGTTAGATTTCCAAATTCGTAAAGCTTTAAT TAACAACAACAACTTATACAGCAACGGTCAAAATACTGGAACAGTTCAAATCACTACTAAAGATAACCAATTATTTACTT TTGATTTAAATAAAAGACTAGAAAACGAACGTGCAAATGTTTACGTAGATGGCAAAAATATAGCTACTATCATTGCTGAT ATTAAATAG Protein sequence : MKKQIIKKVILSTSITLMGLGAVSTFNSDPSLSSQVHAAQFQGQNQADELKKYYSQTPEIFSNKKLTQVEEGSDKGKIYV KIQSSWGAFINVIGNQSWGNVNKLRGKQVDVFGIKDKPTSQYWWAYTEYFTGGVTPAANPSAPVYPIKVTVKKNAHVKSS FDIKAFETRKDKITLKELDFQIRKALINNNNLYSNGQNTGTVQITTKDNQLFTFDLNKRLENERANVYVDGKNIATIIAD IK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| MW1047 | NP_645864.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 7e-33 | 46 |
| SACOL1178 | YP_186041.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 2e-32 | 46 |
| SAUSA300_1059 | YP_493757.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 2e-32 | 46 |
| SAV1166 | NP_371690.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 2e-32 | 46 |
| SA1009 | NP_374282.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 2e-32 | 46 |
| SAKOR_01087 | YP_008491275.1 | Exotoxin | Virulence | vSa¥ã | Protein | 1e-32 | 46 |
| SAUSA300_1060 | YP_493758.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 2e-26 | 44 |
| SAKOR_01088 | YP_008491276.1 | Exotoxin | Virulence | vSa¥ã | Protein | 2e-26 | 44 |
| SACOL1179 | YP_186042.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 2e-26 | 44 |
| MW1048 | NP_645865.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 2e-26 | 44 |
| SAV1167 | NP_371691.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 7e-27 | 42 |
| SA1010 | NP_374283.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 4e-27 | 42 |
