Gene Information

Name : opuBA (Sca_0369)
Accession : YP_002633468.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Unknown
Product : putative proline/glycine betaine ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 377083 - 378039 bp
Length : 957 bp
Strand : +
Note : (Q45460) Choline transport ATP-binding protein opuBA,InterPro: ABC transporter; Hypothetical protein

DNA sequence : 
ATGATTGAATTCAAGCACGTCAGTAAAAAGTATGGCAATAAAATTGCCGTCGATGATGTCAGCTTTAAAATTAACGAAGG
GGAATTCTTTGTTTTAATCGGACCTTCTGGTTGCGGAAAAACAACGACTTTAAAAATGATTAATCGTTTAATTCCGTTGA
CAGAGGGCTACATTTATTTCAAGGATTCACCAATCAGTGATTATCCAGTTTATGAAATGCGTTGGGATATCGGCTATGTA
TTGCAGCAGATTGCTCTATTTCCGCATATGTCAGTAAAAGAAAATATCGCACAAGTTCCTCAAATGAAGGGTTGGGATAA
AGACAGAATTGACCAACGTGTTGATGAATTATTAAAAATGGTGAATTTAGATCCTGATACATATCGTGATCGTAAACCGG
ATGAGTTGTCAGGGGGACAAAGACAACGTGTAGGTGTTGTCAGAGCACTCGCTGCTGATCCGCCCGTTATTTTAATGGAT
GAACCATTCAGTGCTTTAGACCCGATAAGCCGTACAAAATTACAAGATGATTTAATAGAATTGCAAAAGCAGATTAAGAA
AACTATTGTTTTTGTCACACACGACATTGATGAGGCCATGAAATTAGGCGACAGAATTTGTTTGTTGAATGAGGGGCACG
TTGAACAAATTGACACGCCTGAATACTTTATCAATCATCCTAAAAATGATTTTATAAAACAGTTTATTAGTCAATATGAC
AGAAATGTTCAGCAGCAATTGAAATTAGATGATGTTTTAGAAAATACAGAACTGAAGTCTCTTCAATCTACTCAGGATTT
GCCAGTGGTTCAACATGATACTCCATTGAAGAAAGTTTACGAAGATTTGGCACGTTATAATGCTGTTGCAGTAGAACGTG
ACGGCAAGACGCATATGCTGACAAGAGAAGATGTCTTTAACTTCTTAGCTGATAGTGAAAGAGGTGACGCTTCATGA

Protein sequence : 
MIEFKHVSKKYGNKIAVDDVSFKINEGEFFVLIGPSGCGKTTTLKMINRLIPLTEGYIYFKDSPISDYPVYEMRWDIGYV
LQQIALFPHMSVKENIAQVPQMKGWDKDRIDQRVDELLKMVNLDPDTYRDRKPDELSGGQRQRVGVVRALAADPPVILMD
EPFSALDPISRTKLQDDLIELQKQIKKTIVFVTHDIDEAMKLGDRICLLNEGHVEQIDTPEYFINHPKNDFIKQFISQYD
RNVQQQLKLDDVLENTELKSLQSTQDLPVVQHDTPLKKVYEDLARYNAVAVERDGKTHMLTREDVFNFLADSERGDAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-48 46
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-49 46