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Name : dapE (Sca_0033) Accession : YP_002633133.1 Strain : Staphylococcus carnosus TM300 Genome accession: NC_012121 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : 3.5.1.18 Position : 34001 - 35167 bp Length : 1167 bp Strand : - Note : dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is simi DNA sequence : ATGGGAAAATTAAGTTCTGAAGAAAAAGTTGAAATATTAGCAGACTTAGTAGGTATTGAATCTGTAAATGATAACGAATT GGATGTAGCAAACTACTTACATGACTTATTCCAAAAACATCATATAGATTCTAAAATCATAAAACTTACTGATACACGCG CTAATTTGGTAGCTGAAATAGGAAGTGGCAGTCCAGTTCTAGCCGTTTCAGGGCATATGGACGTTGTATCTCCTGGAGAT TCTTCAAAATGGCAGACTCCGCCTTTCAAATTAACTGAAGATAGCGAAGGGCATTTACATGGGCGCGGTGCTTCAGATAT GAAATCAGGTCTTGCTGCGTTTGTAATCAGTATGATCGAACTCCATGAACAAGGATTGCCTAAACACGGTACAGTTCGTT TATTAGCAACAGCTGGTGAAGAAATTGAAGGACACGGCGCAAAAGCTTTTTATAAAGACGGCTATATGAATGATGTAGAT GCGCTTGTTATCGCAGAACCTTCTAAAGATAAAATTATATATGCACACAAAGGTTCCATGGATATTCGTGTCACTTCAAA TGGTAAATCTGTTCATAGCTCTATGCCGAGTCTAGGCTATAATGCAATTAATCCTCTCGTTGATTTTGTTAATCGTATTA ATCAAGCTTATAATTCAATCACAGAAAGCAACGATTTATTAGGAGATTCAGTTGTCAGCGCAACAATCATCAATGGCGGT TCTCAAGTCAATTCAATTCCGGATTATGCAGAAGCTGAATTCAATGTGAGAACGATTCCTGAAGCAGACAACGATAGTTA TCAAAAACTTTTTGAACAAATTGCTAAAAATGTAAAAGTGGATGCACCAGACAGCTATTTAAATATCGACACTTATATGT CTCGCCCTCCTGTCTTCACTAAAGGTGATAACCGCTTAGTTGATATTGCCCAATCATTAAGTAAAAAATACTTAGGCAAA GAAGTTCCGAAAAAAGCTTCACCTGGAGTAACCGATGCTTCTGACTTAGTAGTAGATAAAGGAGAAGATTTCCCGTTCAT CATGTTCGGACCTGGCGAAACAAGCCAAGCACATGTCATTGATGAATATGTAGATAAAAAAGATTATTTAAACTTTATAG ATTTATTTGAAGACTTATTAGTAGAATACCTAGATGAAAATGAATAA Protein sequence : MGKLSSEEKVEILADLVGIESVNDNELDVANYLHDLFQKHHIDSKIIKLTDTRANLVAEIGSGSPVLAVSGHMDVVSPGD SSKWQTPPFKLTEDSEGHLHGRGASDMKSGLAAFVISMIELHEQGLPKHGTVRLLATAGEEIEGHGAKAFYKDGYMNDVD ALVIAEPSKDKIIYAHKGSMDIRVTSNGKSVHSSMPSLGYNAINPLVDFVNRINQAYNSITESNDLLGDSVVSATIINGG SQVNSIPDYAEAEFNVRTIPEADNDSYQKLFEQIAKNVKVDAPDSYLNIDTYMSRPPVFTKGDNRLVDIAQSLSKKYLGK EVPKKASPGVTDASDLVVDKGEDFPFIMFGPGETSQAHVIDEYVDKKDYLNFIDLFEDLLVEYLDENE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 6e-69 | 45 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 4e-68 | 45 |
