Gene Information

Name : Sca_0273 (Sca_0273)
Accession : YP_002633371.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Virulence
Product : putative lipoprotein, AdhesinB family protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 279254 - 280177 bp
Length : 924 bp
Strand : -
Note : (Q8Y653) Manganese-binding lipoprotein mntA precursor,InterPro: Periplasmic solute binding protein; Hypothetical protein

DNA sequence :
ATGAAAAAGTTAGTACCTTTATTAATGGCAGTATTACTATTCTTAGCTGCTTGCGGAGGAGGCCATTCACAATCTTCTTC
TGATCATAAATTAAAAATTGTCACTACCAACTCTATTCTGTATGATATGACCAAAAATATAACTGGCGATCATGCTGAAA
TACATAGCATTGTCCCAGTCGGTCAAGATCCGCATGAATACGAAGTGAAGCCGAAAGATATTAAAGCATTAACAGATGCA
GATATCATCTTATACAATGGACTGAATCTTGAAACAGGCAATGGATGGTTTGATAAAGCTTTAGAACAAGCTGGCAAAAA
CACCAAAGATAAAAGTGTCGTACGCGTTTCTAAAGATGTAAAACCTATTTATTTGAACGGTGCTGAAGGTGACAAATCTA
AACAAGATCCGCATGCGTGGTTAAGTTTGGAAAACGGATTGAAATATGTAAAAACAATCCAACATGCTGTTATCCAACAT
GACAAAGCACATCAAGATGATTACCAAAAACGAGGTGATGACTATCTCAGCAAACTTGAAAAATTGAATAAAGACAGTCA
TGATAAATTCGATGACATTCCTAAAAACCAACGCGCCATGATTACAAGTGAAGGTGCATTTAAATATTTCTCTAAACAAT
ATGGCATTACACCCGGCTATATTTGGGAAATCAATACAGAAAAACAAGGGACACCAAAACAAATGAAACAAGCGATTCAA
TTTGTAAAATCACATCACTTAAAACATCTATTAGTCGAAACAAGTGTAGATCACAAAAGTATGCAAAGTTTAAGTGAAGA
AACAGGTGTACCGATTTCTGGAGAAGTTTATACAGACTCTATTGGCAAAAAAGGCAGTAAGGGCGATTCCTATTACAAAA
TGATGGAATCTAATATTGAAACTGTCCACAACAGTATGAAATAA

Protein sequence :
MKKLVPLLMAVLLFLAACGGGHSQSSSDHKLKIVTTNSILYDMTKNITGDHAEIHSIVPVGQDPHEYEVKPKDIKALTDA
DIILYNGLNLETGNGWFDKALEQAGKNTKDKSVVRVSKDVKPIYLNGAEGDKSKQDPHAWLSLENGLKYVKTIQHAVIQH
DKAHQDDYQKRGDDYLSKLEKLNKDSHDKFDDIPKNQRAMITSEGAFKYFSKQYGITPGYIWEINTEKQGTPKQMKQAIQ
FVKSHHLKHLLVETSVDHKSMQSLSEETGVPISGEVYTDSIGKKGSKGDSYYKMMESNIETVHNSMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 2e-54 44
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 1e-54 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sca_0273 YP_002633371.1 putative lipoprotein, AdhesinB family protein VFG2157 Protein 5e-62 51
Sca_0273 YP_002633371.1 putative lipoprotein, AdhesinB family protein VFG2165 Protein 2e-55 48
Sca_0273 YP_002633371.1 putative lipoprotein, AdhesinB family protein VFG1359 Protein 2e-62 48