Gene Information

Name : capB (Sca_2356)
Accession : YP_002635444.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 2425355 - 2426053 bp
Length : 699 bp
Strand : -
Note : (P39851) Putative tyrosine-protein kinase capB (EC 2.7.1.112),InterPro: Exopolysaccharide synthesis protein; Conserved hypothetical protein

DNA sequence : 
ATGAGTAAAAAAAATAAAACTACAGTGACAACGAACCCTTTGATAACATCTCATCAACCGAGAGCTGTAACGAGTGAAAA
ATTCAGAGGTATTCGTACTAATATTACATTTTCCACTGCTGATAAAGATGTTAAGGGAATTGTATTTACTTCTGAAAAGC
CTTCAGCAGGTAAACCCACTATCTCAGCAAATGTAGCAATTACATTTGCACAAGCGGGCCACAAAACATTGCTATTAGAT
GGTGATATGAGAAAACCAACACAACATTATCTCTTTAATGTTCCTAATATTTTAGGATTATCAAACTTGATTACTCAAAA
TGAAAGTTTGGAAAATGTAATTAATCGTACAGATATTGAAAACTTAGATATTTTGACTTCTGGACCTATACCACCGAATC
CATCTGAATTAATAGGTTCTGTACAATTTCAGAAAATTTATGAAGAATTAAATAAGGTGTATGACCATATCATAATTGAT
ACCCCTCCTATCAACACAGTAACAGATGCTCAATTATATGCTGAGACAAGTGGACATGTTGTTTATGTACTTGATGCTAA
GAGTAACGATAGAAACTCTGTGAAAAAAGGGAAAGAATTGATTGAAAAAACAGGAGCTAAAATTCTAGGAGTAGTATTAA
ATAGAGCCTCATCTGATAAATCTTCAAGCTACTATTCATATTATGGAGAAGAAGAATAA

Protein sequence : 
MSKKNKTTVTTNPLITSHQPRAVTSEKFRGIRTNITFSTADKDVKGIVFTSEKPSAGKPTISANVAITFAQAGHKTLLLD
GDMRKPTQHYLFNVPNILGLSNLITQNESLENVINRTDIENLDILTSGPIPPNPSELIGSVQFQKIYEELNKVYDHIIID
TPPINTVTDAQLYAETSGHVVYVLDAKSNDRNSVKKGKELIEKTGAKILGVVLNRASSDKSSSYYSYYGEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-61 61
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-56 55
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 6e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capB YP_002635444.1 capsular polysaccharide biosynthesis protein VFG1298 Protein 8e-55 57