Gene Information

Name : capC (Sca_2355)
Accession : YP_002635443.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG4464
EC number : -
Position : 2424591 - 2425355 bp
Length : 765 bp
Strand : -
Note : (P96717) Putative protein-tyrosine phosphatase ywqE (EC 3.1.3.48),InterPro: PHP domain C-terminal region; Conserved hypothetical protein

DNA sequence : 
ATGATAGATATTCACAATCATATTATTTCAGGCATAGATGATGGACCTAAAAATGAAGAGAGTATGTTAGATCTAATCAA
GCAAGCAGCTAACCAAGGAATTAAAGGGATAGTTGCAACCCCTCACCATTTGCATACAAAATATTCAAATGATTTTACGA
ACGTTGAAAAAAGAGTTGATAAGCTAAATGATTCTTTAGAAATAAAAGAATTGGGGATTACAATCTATACTGGGCAAGAA
ATCAGAGTATCAGATCAAATCTTAAGTGATATTGATGATGGCAAAATTCAAGGGGTTAATTACTCTAAGTATTTATTAAT
AGAGTTGCCATCTCATAAAGTTCCACATTTTACTCAACGATTAATTTACGAAATTCAGACTCGTGGATATATACCAGTAA
TTGTTCATCCAGAACGTAATAAAGCCATTGCTCAAGACGTTAATTTGTTGTTTGAGTTAATTAATATTGGCGCGCTAAGT
CAATTGACTGCATCTTCACTTACTGGTAAATCAGGGAAAAACATTCAAAAGTTATCTTTCCAAATGATAGAACATAACCT
AGTGCATTTTGTTGCTTCAGATGCACATAGTACAGAACAAAGACCATTTGATTTCGGTGATTTATTTAAAACACCACGAT
TAGACAATTATCAAACTGTAATTCAAACATTCCTCAAAAACAATGAAGCGATGGTATTAGATGAAAATATTGTTGCATCA
CGACCGATTGAATACCGTAAGAAAAAGTTTTTGGGGTTATTTTAA

Protein sequence : 
MIDIHNHIISGIDDGPKNEESMLDLIKQAANQGIKGIVATPHHLHTKYSNDFTNVEKRVDKLNDSLEIKELGITIYTGQE
IRVSDQILSDIDDGKIQGVNYSKYLLIELPSHKVPHFTQRLIYEIQTRGYIPVIVHPERNKAIAQDVNLLFELINIGALS
QLTASSLTGKSGKNIQKLSFQMIEHNLVHFVASDAHSTEQRPFDFGDLFKTPRLDNYQTVIQTFLKNNEAMVLDENIVAS
RPIEYRKKKFLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0062 YP_300152.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 4e-80 62
cap1C AAA64642.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-65 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capC YP_002635443.1 capsular polysaccharide biosynthesis protein VFG1299 Protein 9e-64 50