|
Name : capD'' (Sca_2353) Accession : YP_002635441.1 Strain : Staphylococcus carnosus TM300 Genome accession: NC_012121 Putative virulence/resistance : Virulence Product : capsular polysaccharide synthesis enzyme CapD (fragment 2) Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2422762 - 2424138 bp Length : 1377 bp Strand : - Note : (P39853) Capsular polysaccharide biosynthesis protein capD,InterPro: Polysaccharide biosynthesis protein CapD,Similar to C-terminal part (aa 127-599) of capsular polysaccharide biosynthesis protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 1 DNA sequence : TTGGTAGTAGGTGCAGGTCGTGGTGGTTACTTTTTAATTCGTCAAATGTTAACTACATCAAATATGGGATTAGAACCAGT TTTAGCGGTTGATGATGATCCGAATAAACAGAATATCTCGATAACTATGGGGGTCAAAGTTCAAGGTTATATTAATGATA TTCCAGAACTTGTTAATAAGTTCAAAATTAAAAAAATTATTATTGCTATTCCAACGTTATCGCAAAAAAGATTAAGAGAA ATTACTGAATTATGTAAGAATTTAAATGTTGAAGTTCTAATTATGCCTGATATTGAAAGCGTAATGACAGGTGAATTAGA AGTTAATCAACTCAAGAAAGTAGACGTTGAAGATTTGCTTGGACGTGATCCTGTTGAACTCGATATGAAAATGATATCTG AAGAATTGACGAACAAAACAATCTTAGTAACGGGAGCAGGTGGCTCTATAGGATCGGAGATTTGTCGTCAAGTATGTAAG TTCGCACCTAAAAAGATAGTACTTTTAGGACATGGTGAGAACAGTATCTATTTAATTCACCGAGAATTATTGAAACAGTA CAGAGATGAAATTGAAATTGTTCCTGTCATCGCAGATGTTCAAGATAGAGAAAGAATAATGAATGTGATGAAAACACACA AACCATATTTTGTATATCACGCTGCGGCTCACAAGCATGTACCAATGATGGAATATAATCCAGAAGAAGCAGTTAAGAAT AATGTAATAGGAACTAAAAATGCTGCTGAGTCAGCTCAACTTGCTGAGGTAAGCAAATTTGTCATGATATCAACTGATAA AGCAGTCAATCCACCTAACGTCATGGGAGCATCAAAAAGAATTGCTGAAATGATAATCCAAAACTTAAATACAAGACCTG GAAATACAGATTTTGTGGCGGTTCGTTTTGGTAACGTTTTAGGATCAAGAGGCTCAGTTATTCCTTTATTTAAAGAGCAA ATTGCAGCTGGTGGTCCCGTTACAGTTACCCACCCAGAAATGACTCGTTACTTTATGACAATACCTGAAGCAGCTAGACT TGTATTACAAGCAGGTGCTTTGGCAACAGGTGGAGAAATATTTGTATTAGATATGGGTGAACCAGTAAAAATTGTTGATT TAGCCAAAAATTTAATTAGGCTAAGTGGGTTTAAAGAAGAGGACATAGATATCGAATTCAGTGGTGTCAGACCAGGTGAA AAATTATATGAAGAATTATTAAATGAAAAAGAAATTCATCCTGAACAAGTCTACGAAAAAATTTATCGAGGAAAAGTGAC AAGTGTAGATACGGAAAGTTTGAACAGAATTCTAGATATCTTATTAAACCATTTTACAAAACAACAAATTATAAATATAG CTAATGGAAAGTATTGA Protein sequence : MVVGAGRGGYFLIRQMLTTSNMGLEPVLAVDDDPNKQNISITMGVKVQGYINDIPELVNKFKIKKIIIAIPTLSQKRLRE ITELCKNLNVEVLIMPDIESVMTGELEVNQLKKVDVEDLLGRDPVELDMKMISEELTNKTILVTGAGGSIGSEICRQVCK FAPKKIVLLGHGENSIYLIHRELLKQYRDEIEIVPVIADVQDRERIMNVMKTHKPYFVYHAAAHKHVPMMEYNPEEAVKN NVIGTKNAAESAQLAEVSKFVMISTDKAVNPPNVMGASKRIAEMIIQNLNTRPGNTDFVAVRFGNVLGSRGSVIPLFKEQ IAAGGPVTVTHPEMTRYFMTIPEAARLVLQAGALATGGEIFVLDMGEPVKIVDLAKNLIRLSGFKEEDIDIEFSGVRPGE KLYEELLNEKEIHPEQVYEKIYRGKVTSVDTESLNRILDILLNHFTKQQIINIANGKY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-159 | 76 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-152 | 75 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capD'' | YP_002635441.1 | capsular polysaccharide synthesis enzyme CapD (fragment 2) | VFG1300 | Protein | 1e-150 | 74 |
