Gene Information

Name : Sca_2339 (Sca_2339)
Accession : YP_002635427.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2407912 - 2408670 bp
Length : 759 bp
Strand : +
Note : no Shine-Dalgarno sequence,(P46490) Hypothetical protein HI0198,InterPro: Protein of unknown function DUF81; Hypothetical protein

DNA sequence :
ATGACAATAATACATATATTATTAATGCTTTCAATCGGTGTAGGCGGCGGATTTATTGCGGGATTAGTCGGTATCGGAGG
TTCTATCATCATCTATCCAGCGATATTATTATTACCGCCTTTATTCGGAACACCTGAATATAGTGCTTATATTGCATCTG
GATTAACATCCAGCCAAGTATTCTTCAGTACATTAAGCGGTTCAATCAAAGCTATTAAAGAACCTGATTTCAATGCGCCA
CTGGTTTTATATATGGGTGGTGGTATGCTGGGTGGCAGTGTAGCAGGTGCCATGGTTGCCAATCTGCTGACTACACCAGT
TATTAACGCTGTTTATATCGGTGTAGCAATTCTGGCTTTAATTTTGATGTTTATTAAAGTAAAACCCCACGCTGATGCTG
GTCATTCATACAATCACTGGCTATTAATCGCAGTGGGTGCTGTGATTGGTTTAGTTGCAGGTATCATCGGTGCTGGTGGC
GCTTTTATTATTATCCCAGTCCTGCTTGCTATTTTTAAACTGCCAATGAATACAGTCGTAACAAATAGTATCGTCATTGC
TTGCGTATCTGCCATCGGATCATTTGCGATTAAATTAATGCAAGGTTATGTGCCGCTCGGCAATGCGATATTTTTAATCG
TCGGCAGTGTGATATTTGCGCCGATTGGTTTAAAAGTCGGACGTCTTTTACCTAATATTGTTCAAAAAGCAATCATCAGT
ATTCTAATTGTAATTGCGATAACAGAATTAATTTTTTAA

Protein sequence :
MTIIHILLMLSIGVGGGFIAGLVGIGGSIIIYPAILLLPPLFGTPEYSAYIASGLTSSQVFFSTLSGSIKAIKEPDFNAP
LVLYMGGGMLGGSVAGAMVANLLTTPVINAVYIGVAILALILMFIKVKPHADAGHSYNHWLLIAVGAVIGLVAGIIGAGG
AFIIIPVLLAIFKLPMNTVVTNSIVIACVSAIGSFAIKLMQGYVPLGNAIFLIVGSVIFAPIGLKVGRLLPNIVQKAIIS
ILIVIAITELIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0054 YP_042180.1 hypothetical protein Not tested SCC476 Protein 5e-35 66
unnamed BAA86633.1 hypothetical protein Not tested Type-I SCCmec Protein 4e-35 66
unnamed BAA82172.1 - Not tested Type-II SCCmec Protein 4e-35 66
SAPIG0064 YP_005732874.1 domain of unknown function, putative Not tested Type-V SCCmec Protein 2e-26 63
unnamed BAB83475.1 - Not tested SCC 12263 Protein 2e-26 63
SACOL0049 YP_184959.1 hypothetical protein Not tested Type-I SCCmec Protein 1e-25 62
unnamed BAA94322.1 hypothetical protein Not tested Type-I SCCmec Protein 1e-25 62