|
Name : Sca_2197 (Sca_2197) Accession : YP_002635287.1 Strain : Staphylococcus carnosus TM300 Genome accession: NC_012121 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 2242731 - 2245121 bp Length : 2391 bp Strand : - Note : functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis ap DNA sequence : ATGGCTAATATGATGCAGCAAACGATTAACCGCATGCGGTTGCGCTCTTTAGAAAGAACATTACGCAAAATTAACCAGTT GAGTGACACAATGGCTGAAAAAACAGATGCTGAATTGCAGAAACAAACTGTTGTTTTTAAAGCAGCATTAAAGAATGGAA AGTCTTTAGATGATATTTTACCGCAAGCTTATGCGACAGCACGAGAAGCCAGCAAACGTGTGCTTGGTATGTATCCAAAA GATGTGCAAGTGCTCGGTGCTATTGTCTTGCATGAAGGTAATATCGCAGAAATGCAGACTGGAGAAGGTAAAACACTGAC AGCGACATTACCGTTATATTTAAATGCTTTAAGTGGGCACGGTGCTTTTCTAGTTACCACCAATGATTATTTAGCAGAAC GCGATTATGAAGAAATGCGTCCTTTGTATGAATGGCTGGGTTTAACTACTTCTTTAGGTTTTATCGGAGATCCTGATTAT GAATACCAGCCTGGAGAGAAACAAGCGATTTATAAAGCAGATATTATTTATACGACAAATGGCCGTTTAGGTTTTGATTA TTTAATCGATAACTTGGCTGATTCATTAGAAGGAAAATTTATGCCGGATTTGAATTACGCATTGATTGATGAAATTGATT CTATTATTTTAGATGCTGCACAAACACCACTGGTGATTTCTGGCGCACCGCGTGTACAATCTAATTTATTTGAAATTACG AAGCAATTTGTACAAACGCTGGAAAAAGAACGCGACTTTAAAATTGATGAACGTAAGAAGGAAGTGTGGCTGACTTCAAG AGGTATCAAAGCAACACGAGAATATTTCAATGTACCGGATTTATTTGAAACGCGCCATTTAGATTTAGTGCGCAATATTA ATTTAGCATTGCGTGCACGTTATTTGTTTGAAGTGGATATCGATTATTATGTCTTAAAAGGTGAAATTGTATTAATCGAT CGTATTACAGGACGCTTATTGCCAGGAACAAAATTACAATCAGGCCTGCATCAAGCGATTGAAGCTAAAGAAGATATTGA GATTACCAATGACATGAGTATTATGGCAACGATTACGTTCCAAAATTTATTCAAGCAATTCCATCAATTTGCAGGAATGA CCGGTACGGCTAAACAAGGTGAAAAAGAGCTGAATGATTTATATAGTAAAATTGTAGTTCAAATTCCGACTGATAAACCT GTGCAGAGGGAAGATTATAAAGATAGAGTATTTATGACGATTGAAGATAAGAACAAGGCATTGATGCAACGGTTATTAGA GCTCTATCATTCTAAGAGGCCGGTGTTGTTGATTACACGAACAGCTGAAGCGGCTGAACAATTTTCGATGTTTCTTTTTC AAAACAACATCCCAAATAATTTGCTGATTGCACAAAATGCAGCAAAAGAAGCGCAGATGATTGCTGAAGCGGGACAACTC GGTGCAGTAACTGTGGCAACGAGTATGGCTGGGCGCGGTACGGATATAAAATTAGAAGAAGGTGTCGCTGAACTAGGAGG ATTAGCGGTTTTAATTCATGAACATATGGATAACAGCCGTGTTGATCGCCAATTGCGCGGTCGTTCTGGTCGGCAAGGCG ACCCAGGTTCATCGCAAATTTATATTTCACTTGAAGATTATGTCGTAAAACGTTGGGGCAATACCAATTTATTAGACAAT GATAAGTTGAAGCAACAAGATGCATCAGAGCTAGAACAAAGCCCGCTCTTTCGACATAGAGTCAGCAAGATTGTACATAA AGCACAGCAGATTTCTGAAGAACAAGGTATCACAGCACGCGAGATGGCTAATGAATATGAAAAAAGCATCAGTATCCAAC GAGGATTGATTTACAAAGAACGTAATAATGTACTGGCCCTTAATGATTTCAGCCAGTTCGATATAGGACGTATGGCAGAA GATGTATATCGTCAATTTGTTAAAGAACATTGGTACCAACTTGATGCTGATGTGTTGCGTTCTTATATTTACAAAAATGT CAGTTTTGATTTCAAAGGTGATGTTGAAGCAACAACATTGGAAAGTCAAGAGACTGTCATTGGATTTTTAGTGCGCTTAT TTCAATCACAGAAGCGGAGAACTGCAGAAACTATCAATGATGCGGTAATGTATCATGAATTTTTACAGAAGTGTGTATTA AAGGCAATAGACCAAGGGTGGATTCGACAAGTAGACCATCTGCAGCAACTAAAAGGCAGTGTAAATAATCGTCAAAATGG ACAACGAAATGCAATATTTGAATACCATCGTGCAGCTTTAGAATCATATGAAACGATGGGAGAAGAAATTAAACAAAATA TGATTCGCAATATTAGCTTGAGTATGGTGACATTCGGCAAAGAAGATGAAATGATTATCCATTTTCCATAA Protein sequence : MANMMQQTINRMRLRSLERTLRKINQLSDTMAEKTDAELQKQTVVFKAALKNGKSLDDILPQAYATAREASKRVLGMYPK DVQVLGAIVLHEGNIAEMQTGEGKTLTATLPLYLNALSGHGAFLVTTNDYLAERDYEEMRPLYEWLGLTTSLGFIGDPDY EYQPGEKQAIYKADIIYTTNGRLGFDYLIDNLADSLEGKFMPDLNYALIDEIDSIILDAAQTPLVISGAPRVQSNLFEIT KQFVQTLEKERDFKIDERKKEVWLTSRGIKATREYFNVPDLFETRHLDLVRNINLALRARYLFEVDIDYYVLKGEIVLID RITGRLLPGTKLQSGLHQAIEAKEDIEITNDMSIMATITFQNLFKQFHQFAGMTGTAKQGEKELNDLYSKIVVQIPTDKP VQREDYKDRVFMTIEDKNKALMQRLLELYHSKRPVLLITRTAEAAEQFSMFLFQNNIPNNLLIAQNAAKEAQMIAEAGQL GAVTVATSMAGRGTDIKLEEGVAELGGLAVLIHEHMDNSRVDRQLRGRSGRQGDPGSSQIYISLEDYVVKRWGNTNLLDN DKLKQQDASELEQSPLFRHRVSKIVHKAQQISEEQGITAREMANEYEKSISIQRGLIYKERNNVLALNDFSQFDIGRMAE DVYRQFVKEHWYQLDADVLRSYIYKNVSFDFKGDVEATTLESQETVIGFLVRLFQSQKRRTAETINDAVMYHEFLQKCVL KAIDQGWIRQVDHLQQLKGSVNNRQNGQRNAIFEYHRAALESYETMGEEIKQNMIRNISLSMVTFGKEDEMIIHFP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 9e-169 | 46 |
