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Name : capD (Sca_2026) Accession : YP_002635116.1 Strain : Staphylococcus carnosus TM300 Genome accession: NC_012121 Putative virulence/resistance : Virulence Product : putative capsular polysaccharide synthesis enzyme Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2037449 - 2039332 bp Length : 1884 bp Strand : - Note : (P39853) Capsular polysaccharide biosynthesis protein capD,InterPro: Polysaccharide biosynthesis protein CapD; Conserved hypothetical protein DNA sequence : GTGTCCAAAATACCAGTGAGACAGCAGCGTCTGATATTCTTTTTAATTATAGACTCGCTTATCGTCGCATTTTCTGTCTT CTTAAGTTATTCAATTCTAGAACCATATTTTCGTGGTTATTCTTTAACATTACTTATATTATCTTCATTAGTTTTACTAT GTTCACATCATATTTTTGCGAGTGTTTTCAATTTATACCATCGTGCATGGGAATACGCCAGTATTAATGAAATGTTTGTC ATCGTTAAAGCTGTAACGTGTTCGATGGCTTTAACTGTGCTTATCGTTCCATTCTTCACACATGAAGGACCATTTTTAAG ATTGTATTTTATCACATGGATGATGCATATTCTGTTAATTGGCGGTTCAAGATTATCTTGGAGAATATTCAATAGAACGG TTAATCGTCGAGGTCGAAAATCTAAAAACACTTTAGTTATCGGTGCAGGCGCAGGCGGTTCAATGCTGGTTCAACAAATG TTGAAACGTCCTGGTATGGGTATGGAACCTGTGCTTGCTGTAGATGATGACCCTAATAAACAAAAATTAACGATTACTGA AGGCGTTAAAGTTCAAGGGAAAATTGAAGATGTTCCTGATTTAGTACGCAAGTATCGTATTAAAAAAATAATCATTGCGA TTCCGACATTATCGCAGAAACGATTACGTGAAATTAATGAAATATGTGAAAATCTTGGCGTTACTGTATTGAAAATGCCG AATATCGAAGAAGTTATGTCTGGTGAATTAGAAGTTAACCAATTGAAAAAGGTTGAAGTAGAAGATTTGCTTGGACGTGA TCCAGTGGAACTAGATATGCAATTGATTTCTAAAGAATTAACACATCAAACGATTATGGTTACTGGTGCAGGCGGTTCTA TCGGTTCAGAAATCTGTCAACAAGTTTGTCGTTTTGCCCCTGCTAGAATTATCTTACTTGGACACGGTGAGAATAGTATT TATTTGATTCACCAAGAACTGCAAAAACAATATGGCGATCAAATTGATATTGTTCCTGTGATTGCTGATATTCAAGATCG TTCTCGTATGTTTAAAATTTTAGATCATTATCAACCGTATGTTGTTTACCATGCTGCAGCACATAAACATGTGCCAATGA TGGAATATAACCCAAGTGAAGCTATCAAGAACAATGTAATGGGTACGAAAAATACGGCAGAAGCTGCACGTCATGCAAGA GTCAGCAAATTTGTAATGATTTCAACTGACAAAGCGGTAAACCCTCCGAATGTGATGGGAGCTTCTAAACGTGCTGCTGA GATGATTGTTCAAAGTATGAATGAGGACAATTGTAAAACAGATTTTGTGGCTGTACGATTTGGTAATGTGCTTGGTTCAC GCGGTTCTGTTATTCCATTGTTCAAAAAACAAATCGAAGCAGGCGGACCGATTACTGTTACGCACCCTGATATTACACGT TACTTTATGACGATTCCTGAAGCTGCACGTTTGGTTTTACAAGCAGGTGCGATTGCTGAAGGCGGAGAGGTCTTTGTACT CGATATGGGTGAACCTGTGAAAATTGTTGATTTAGCCAAAAACTTAATCCGATTAAGCGGATATAAAGATGGCGATATTG AGATTCAATTTACTGGTTTGCGACCTGGCGAGAAATTATACGAAGAGTTGTTAGATGAAGATGAAATTCATCCAGAACAA GTATATGAAAAAATCTATCGCGGTAAGGTAGAAACAATGAAAAATGATGATGTATTGCGTATCCTTGATGAAATCATTCA TAGTAAAGATTATAAGCAAAAATTAATTGACTTAGCTAATCATCGCTATGAAGATAAAAATGGAAAAATCGATACTGCAG ACGAAGGGAACGATGACATACCACCCTTTCGTGTAATTAATTAA Protein sequence : MSKIPVRQQRLIFFLIIDSLIVAFSVFLSYSILEPYFRGYSLTLLILSSLVLLCSHHIFASVFNLYHRAWEYASINEMFV IVKAVTCSMALTVLIVPFFTHEGPFLRLYFITWMMHILLIGGSRLSWRIFNRTVNRRGRKSKNTLVIGAGAGGSMLVQQM LKRPGMGMEPVLAVDDDPNKQKLTITEGVKVQGKIEDVPDLVRKYRIKKIIIAIPTLSQKRLREINEICENLGVTVLKMP NIEEVMSGELEVNQLKKVEVEDLLGRDPVELDMQLISKELTHQTIMVTGAGGSIGSEICQQVCRFAPARIILLGHGENSI YLIHQELQKQYGDQIDIVPVIADIQDRSRMFKILDHYQPYVVYHAAAHKHVPMMEYNPSEAIKNNVMGTKNTAEAARHAR VSKFVMISTDKAVNPPNVMGASKRAAEMIVQSMNEDNCKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPITVTHPDITR YFMTIPEAARLVLQAGAIAEGGEVFVLDMGEPVKIVDLAKNLIRLSGYKDGDIEIQFTGLRPGEKLYEELLDEDEIHPEQ VYEKIYRGKVETMKNDDVLRILDEIIHSKDYKQKLIDLANHRYEDKNGKIDTADEGNDDIPPFRVIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 0.0 | 72 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 0.0 | 70 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capD | YP_002635116.1 | putative capsular polysaccharide synthesis enzyme | VFG1300 | Protein | 0.0 | 69 |
| capD | YP_002635116.1 | putative capsular polysaccharide synthesis enzyme | VFG0029 | Protein | 9e-79 | 44 |
