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Name : clpC (Sca_0181) Accession : YP_002633279.1 Strain : Staphylococcus carnosus TM300 Genome accession: NC_012121 Putative virulence/resistance : Virulence Product : ClpC ATPase family protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 188835 - 191300 bp Length : 2466 bp Strand : + Note : (P37571) Negative regulator of genetic competence clpC/mecB,InterPro: AAA ATPase central region; Hypothetical protein DNA sequence : ATGTTATTCGGCAGACTTACAGAACGTGCACAACGTGTATTAGCACATGCACAAGAAGAAGCGATTCGTTTGAATCATTC AAATATCGGAACTGAACACTTACTTCTTGGTTTAATGAAAGAACCAGAAGGTATTGCAGCAAAAGTATTAGAAAGTTTCG GTATTACAGAAGACCTTGTAGTAGCAGAAGTAGAAAAATTAATTGGACAAGGCCAAGAACAAGTCGGCACATTGCACTAT ACGCCAAGAGCTAAGAAAGTTATTGAACTTTCAATGGATGAAGCACGTAAACTTCACCATAATTTCGTTGGAACAGAGCA TATCTTGCTCGGTTTAATCCGTGAAAATGAAGGCGTAGCAGCACGTGTATTTGCTAACTTGGATTTAAATATTACAAAAG CACGCGCACAAGTAGTAAAAGCACTTGGCAGCCCTGAAATGAGCAACAAAAATGCGCAAGCAACAAAATCAAATAATACA CCAACATTAGATGGTTTAGCACGTGACTTAACAGTAATCGCAAAAGACGGCACATTAGATCCGGTTGTCGGACGCGATAC AGAAATCACACGTGTGATTGAAGTTTTAAGTCGTCGTACTAAAAACAACCCAGTATTAATTGGTGAACCTGGTGTTGGTA AAACAGCAATTGCAGAAGGCTTAGCACAAGCAATTGTAAATAATGAAGTACCTGAAACATTAAAAGATAAACGTGTAATG TCATTAGACATGGGTACTGTAGTCGCTGGTACAAAATACCGCGGTGAATTTGAAGAAAGACTTAAAAAAGTGATGGAAGA AATTCACCAAGTTGGCGACGTTATCTTATTCATCGATGAATTGCATACTTTAATCGGTGCAGGTGGCGCAGAAGGTGCAA TTGATGCATCTAATATCTTGAAACCAGCATTAGCACGTGGTGAATTGCAAGCAATCGGTGCTACAACATTAGACGAATAT CGTAAACACATTGAAAAAGATGCAGCGTTAGAACGTCGTTTCCAACCTGTTCAAGTAGATGAACCAACTGTTGAAGATAC AGTTTCTATCTTAAAAGGTTTACGTGATCGTTATGAAGCACATCACCGTATTAATATCTCTGATGAAGCAATCGAAGCAG CAGCACGTTTAAGTGACCGTTATGTTTCAGATCGTTTCTTACCAGACAAAGCAATCGACTTAATCGATGAAGCAAGTTCA AAAGTAAGACTAAAAAGTCATACAACACCAACAAACTTGAAAGAAATCGAACAAGAAATTGAAAAAGTTAAAAACGAAAA AGATGCAGCTGTACATTCTCAAGAATTCGAAAATGCTGCAAACCTTCGTGATAAACAAACTAAATTAGAAAAACAATATG AAGACGCTAAAAACGAATGGAAAAATGCACAAGGCGGTTCTAACACAACATTAAGCGAAAATGATATCGCTGAAGTGATT GCTGGATGGACTGGTATTCCATTGACTCGTCTAAATGAAACTGAATCTGAACGTCTATTGAACTTAGAAGACACATTGCA TGAACGTGTTATCGGTCAAAAAGACGCAGTTACTTCAATCAGTAAAGCTGTAAGACGTGCGCGTGCTGGATTGAAAGATC CTAAACGTCCAATCGGAAGCTTTATCTTCTTAGGACCAACTGGTGTAGGTAAAACTGAATTAGCACGTGCTTTAGCAGAA TCAATGTTCGGAGACGAAGATGCAATGATTCGTGTTGATATGAGTGAGTTCATGGAAAAACACGCAGTCAGTCGTTTAGT AGGTGCCCCTCCAGGCTATGTAGGTCATGATGATGGTGGTCAATTAACTGAAAAAGTAAGACGTAAACCTTACTCAGTTA TTCTTTTCGATGAAATCGAAAAAGCACACCCAGATGTATTCAACATCTTGCTTCAAGTGCTTGATGATGGTTTCTTAACT GATACTAAAGGACGCAGAGTAGATTTCCGTAACACAGTAATTGTTATGACTTCTAACGTCGGTGCACAAGAATTACAAGA CCAACGCTTTACTGGCTTTGGCGGCGGTTCTTCAGAAGGACAAGACTACGAAACAATTCGCAGTACAATGTTGAAAGAAT TGAAAAATGCTTTCCGTCCTGAATTCTTGAACCGTGTAGATGACATTATTGTCTTCCACAAACTTAATAAAGATGAATTG AAAGAAATTGTAACTAAAATGGTTAATAAACTTACAGACCGCTTATCAGAACAAGATATTAATATCAGCGTAACTGAAAA AGCGAAAGAAAAAATTGCTGAAGAAGGCTATGACCCTCAATATGGTGCACGTCCACTTATCAGAGCAATTCAAAAAACAG TTGAAGACAACTTGAGTGAATTAATCTTAGACGGTAACCAATTAGAAGGTAAAGATGTAGTCGTTGACCATAATGGTGAA AAATTCGAATACAACATCAATGATCGTGAAACTGAAGAAACAGTTGAAACTGCTACAAAAGCATAA Protein sequence : MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFGITEDLVVAEVEKLIGQGQEQVGTLHY TPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGSPEMSNKNAQATKSNNT PTLDGLARDLTVIAKDGTLDPVVGRDTEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVM SLDMGTVVAGTKYRGEFEERLKKVMEEIHQVGDVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQAIGATTLDEY RKHIEKDAALERRFQPVQVDEPTVEDTVSILKGLRDRYEAHHRINISDEAIEAAARLSDRYVSDRFLPDKAIDLIDEASS KVRLKSHTTPTNLKEIEQEIEKVKNEKDAAVHSQEFENAANLRDKQTKLEKQYEDAKNEWKNAQGGSNTTLSENDIAEVI AGWTGIPLTRLNETESERLLNLEDTLHERVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE SMFGDEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGFLT DTKGRRVDFRNTVIVMTSNVGAQELQDQRFTGFGGGSSEGQDYETIRSTMLKELKNAFRPEFLNRVDDIIVFHKLNKDEL KEIVTKMVNKLTDRLSEQDINISVTEKAKEKIAEEGYDPQYGARPLIRAIQKTVEDNLSELILDGNQLEGKDVVVDHNGE KFEYNINDRETEETVETATKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_002633279.1 | ClpC ATPase family protein | VFG0079 | Protein | 0.0 | 71 |
| clpC | YP_002633279.1 | ClpC ATPase family protein | VFG0080 | Protein | 5e-159 | 52 |
