Gene Information

Name : Sca_1873 (Sca_1873)
Accession : YP_002634964.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1879058 - 1879489 bp
Length : 432 bp
Strand : -
Note : (P59641) Replicase polyprotein 1ab (pp1ab) (ORF1AB) [Includes: Replicase polyprotein 1a (pp1a) (ORF1A)] [Contains: Leader protein; p65 homolog; NSP1 (EC 3.4.24.-) (Papain-like proteinase) (PL-PRO); 3C-like proteinase (EC 3.4.24.-) (3CL-PRO) (3; Hypothetic

DNA sequence :
ATGCGCAGAATATTATATACATTTTTGACTTATACCATTATTGGTTTATTAAGCGGCGTATACTATCGTGAGCTGACAAA
AGCTTATGATTTTACAGGTGATACACAACTTGTAGTCGTACATACGCATACATTAATGTTAGGTATGTTTATGTTCTTGA
TTTTGATTGTTTTTGAAAAACTTTTCCAATTAAGTAAATATTATTTATTTAACTGGTTCTACTATGTTTATAACATTGGT
GTTGTTGTTACAGTCGGTATGATGGCTATTAAAGGAACAATGCAAGTAGTAGGTGCACACGTTTCACCAGGACTTGCAGG
TATTGCAGGACTTGGCCATATGACATTGTCTGCTGGCTTCATCATTTTATTCTTCTTATTGAAGAAAGCAATTCTTACAG
ATCCGATTGATGGAAAACCATATCAAAAATAA

Protein sequence :
MRRILYTFLTYTIIGLLSGVYYRELTKAYDFTGDTQLVVVHTHTLMLGMFMFLILIVFEKLFQLSKYYLFNWFYYVYNIG
VVVTVGMMAIKGTMQVVGAHVSPGLAGIAGLGHMTLSAGFIILFFLLKKAILTDPIDGKPYQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0048 NP_763603.1 hypothetical protein Not tested SCCpbp4 Protein 7e-18 50
SE0028 NP_763583.1 hypothetical protein Not tested SCCpbp4 Protein 4e-18 50
CD241_0112 YP_005124381.1 hypothetical protein Not tested Not named Protein 2e-11 42
DIP0114 NP_938510.1 hypothetical protein Not tested Not named Protein 3e-11 41