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Name : pdx1 (Sca_0173) Accession : YP_002633271.1 Strain : Staphylococcus carnosus TM300 Genome accession: NC_012121 Putative virulence/resistance : Unknown Product : pyridoxal biosynthesis lyase PdxS Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0214 EC number : - Position : 182797 - 183684 bp Length : 888 bp Strand : + Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate DNA sequence : ATGTCTAAACAAGTAGGTTCAGATCGAGTAAAACGTGGAATGGCTGAAATGCAAAAAGGCGGCGTTATCATGGACGTTGT CAATGCAGAACAAGCTAAAATCGCAGAAGAAGCAGGAGCAGTAGCTGTTATGGCTTTAGAACGTGTGCCTTCTGATATCA GAGCAGCTGGTGGAGTGGCACGTGCATGTAATCCTAAAATCGTTCAAGAAGTAATGGATGCTGTTTCAATTCCAGTTATG GCAAAATGCCGTATTGGTCATATTACTGAAGCACGTGTACTTGAATCAATGGGTGTTGACTACATTGATGAATCTGAAGT GTTAACTCCAGCAGATGAAGAATATCATTTATTGAAAAGCGATTATACTGTACCATTCGTATGCGGATGCCGTAATTTAG GTGAAGCTGCACGCCGTATTGGTGAAGGTGCTGCGATGTTGCGTACAAAAGGGGAACCTGGAACAGGTAATATCGTAGAA GCAGTTCGTCATATGCGTCAAGTTAACTCAGAAGTTGCGAAATTAACTGTAATGCCAGACGATGAAATTATGACATTTGC TAAAGAAATCGGTGCACCATACGAAGTATTGAAATCAATTAAAGATAACGGACGTTTGCCTGTTGTTAACTTTGCAGCTG GCGGTGTTGCAACACCTCAAGATGCTGCGTTAATGATGCAATTAGGCGCAGACGGCGTATTTGTCGGTTCAGGTATCTTC AAATCTGAAGACCCTGAAAAATTTGCGAAAGCAATTGTTCAAGCAACAACACATTACACAGATTACGAATTAATCGGTAA ACTTGCTCAAGAATTAGGCGAAGCAATGAGAGGCTTAGATGTTAATCAATTATCTCTAGAAGAACGTATGCAAGAGCGTG GCTGGTAA Protein sequence : MSKQVGSDRVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARACNPKIVQEVMDAVSIPVM AKCRIGHITEARVLESMGVDYIDESEVLTPADEEYHLLKSDYTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVE AVRHMRQVNSEVAKLTVMPDDEIMTFAKEIGAPYEVLKSIKDNGRLPVVNFAAGGVATPQDAALMMQLGADGVFVGSGIF KSEDPEKFAKAIVQATTHYTDYELIGKLAQELGEAMRGLDVNQLSLEERMQERGW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0227 | NP_938620.1 | pyridoxal biosynthesis lyase PdxS | Not tested | Not named | Protein | 1e-78 | 60 |
| pdxS | YP_005137204.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 1e-78 | 60 |
| pdxS | YP_005141805.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 2e-78 | 60 |
