Gene Information

Name : Sca_1678 (Sca_1678)
Accession : YP_002634769.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Virulence
Product : putative FecCD transport family protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1701104 - 1702066 bp
Length : 963 bp
Strand : -
Note : (P15029) Iron(III) dicitrate transport system permease protein fecD,InterPro: FecCD transport family; Hypothetical protein

DNA sequence : 
ATGACGAAACATTTAGGCAGAAAGTATCTTATTGTCATTGCAATATTAATTATTGTGTCTTTATTTTCACTCTCAGTCGG
TGCTGTTTTTGTCAATCCGCTTGAAGCTATTAAAGGATTGATTATGCAAGATGATTTCATTATTAATGAATATAGAGAAC
CGCGTATGCTTGTCGGCTTGCTTGTGGGAAGCAGTATTGCCATTTCTGGTGCTGTAATTCAAGGTGTTGTCAGAAACCCA
TTAGCATCTCCAGATGTAATCGGTATTACAAAAGGTGCAAGTTTAGCGGCAGTAACTGTATTAATTTTATTCCCTAAAGC
ACCTATTTATGCATTGCCTGTTGCATCTTTCATTGGTGCATTAGTAGTGAGTTTAATCTTATCTTATTTAATTGCACGTA
AAGATGTACAAGGATCTAATCTAGCGTTAATCGGTTTAGCCATCGGTGCAATTTGTATGGCAGCGGTGCAATATTTATTA
ATCCGCTTCCCGCTTGAAGCGAATTTAGCACTCGTTTGGCTGACGGGTAGTTTATTTGGCCGTAATATGGACCATGTCCT
TTCAATTTTACCGTGGTTCATTGTGACGGTACCGTTGATTTTATTCTTAGCACAACGTTTAGATATTATTCATCTTGGTG
ACCAAGTCGCAACTGCGCTTGGTACAAGAGTCAGAACTGTTAAAATGGTAATGTTGATTTTAGCAGTGATGCTTGCAGGT
TCATCTATTGCAGTAGTCGGTGGTTTAAGCTTCTTAGGTTTAATTGCACCGCACATAGCAAGAACTATTGTCGGACATAA
ACATATTCATATTATTACGATGTCTGGTTTAATCGGTGCTATTTTAATTATTGTCAGTGATACATTAGCACGCGGTATTC
ATCCACCGTTAGATATACCGGTCGGTGTCATTATTGCCATTGTAGGTGCACCTTATTTTATCTATGTATTAAGAAAAATG
TAG

Protein sequence : 
MTKHLGRKYLIVIAILIIVSLFSLSVGAVFVNPLEAIKGLIMQDDFIINEYREPRMLVGLLVGSSIAISGAVIQGVVRNP
LASPDVIGITKGASLAAVTVLILFPKAPIYALPVASFIGALVVSLILSYLIARKDVQGSNLALIGLAIGAICMAAVQYLL
IRFPLEANLALVWLTGSLFGRNMDHVLSILPWFIVTVPLILFLAQRLDIIHLGDQVATALGTRVRTVKMVMLILAVMLAG
SSIAVVGGLSFLGLIAPHIARTIVGHKHIHIITMSGLIGAILIIVSDTLARGIHPPLDIPVGVIIAIVGAPYFIYVLRKM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 2e-40 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sca_1678 YP_002634769.1 putative FecCD transport family protein BAC0163 Protein 1e-40 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sca_1678 YP_002634769.1 putative FecCD transport family protein VFG1043 Protein 1e-40 45