Gene Information

Name : Sca_1531 (Sca_1531)
Accession : YP_002634621.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1550831 - 1551718 bp
Length : 888 bp
Strand : -
Note : Hypothetical protein

DNA sequence :
ATGGGTTTTGAACAAGTCAAATTACAACATGACTTCAAAATAAACGTGATAGAATACAAAAATTTATATTCCGATTCCTT
TGTTCAAAGTAATAAGTTACTTTGGTCGGAATGGATCAATAGATTACAAACACCTATGAATAATGGTGATAAATATAAGC
GTGGATTAGTCCTTTACGGTGATGTAAAAGATATGGAAAAAGATGGAAAACTTATCCAAAAATACCGTAATGATGAAAAT
ATTATAAACAGAAATACACTAGCACTTGATTATGACGATATTACAGATTTCAAAGGATTATATAAATCAATTTGTAAGCA
ATTAGAGGGCTATGCGTGGGCTTTCCACACAACGTATAACCACACTACAGATAATCCTAGAATACGCCTTATTGTGCCTA
TAAACGAACCAGTAAGTGCAGACGACTATAGAAAGTATACACAAGCCTTAGCACATCAAATAGGATACAAAATTGATGAA
GGTAGTTATCAACCATCAAGAGCTATGGCATTACCAGTAAGACCCGATAAAGATATACCTTACATCTTTAAATATAACGA
TGCACCAGCAATAACTATTGATGATTTAAATCAGTTGTCCACAAATCTGGACAACGTTCAAGCAGATAAACCATTTACCA
TAAACTACTCAAGTCAATATAAAAAACGTGATTCATCATATTGGCGTGATATAGCCTTCGGTGTAGGAGAAGGTGAACGT
AATCAAACATTAGCATCATTAATTGGATACTTATTGCGTAGGTATGTAGATGTAAATTTAGTTTATGGCTTAGCGATAGC
TTGGGCGCAGCAGTGTACACCAGCGATTGATGATAAAGAAGTAAACAACACATTTAAATCAATATTGAAAAAGGACTTGA
ATAAATAG

Protein sequence :
MGFEQVKLQHDFKINVIEYKNLYSDSFVQSNKLLWSEWINRLQTPMNNGDKYKRGLVLYGDVKDMEKDGKLIQKYRNDEN
IINRNTLALDYDDITDFKGLYKSICKQLEGYAWAFHTTYNHTTDNPRIRLIVPINEPVSADDYRKYTQALAHQIGYKIDE
GSYQPSRAMALPVRPDKDIPYIFKYNDAPAITIDDLNQLSTNLDNVQADKPFTINYSSQYKKRDSSYWRDIAFGVGEGER
NQTLASLIGYLLRRYVDVNLVYGLAIAWAQQCTPAIDDKEVNNTFKSILKKDLNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14336.1 DNA primase-like protein Not tested SaPI68111 Protein 6e-51 57
SAV0790 NP_371314.1 hypothetical protein Not tested vSa3 Protein 4e-66 53
SACOL0896 YP_185767.1 pathogenicity island protein Not tested vSa1 Protein 5e-64 52
unnamed AAL04137.1 unknown Not tested SaPI3 Protein 4e-64 52
unnamed AAC28965.2 - Not tested SaPI1 Protein 9e-65 52
unnamed AAP55245.1 unknown Not tested SaPIbov2 Protein 5e-61 48
unnamed ABJ97299.1 hypothetical protein Not tested SaPI2 Protein 3e-58 47
SAV2022 NP_372546.1 hypothetical protein Not tested vSa4 Protein 5e-57 47
SA1829 NP_375130.1 hypothetical protein Not tested vSa4 Protein 5e-57 47
SAAV_0796 YP_003281719.1 pathogenicity island protein ORF15 Not tested SaPIAv Protein 3e-58 47
SAB0350 YP_415852.1 pathogenicity island protein Not tested SaPIbov Protein 2e-55 45
unnamed AAG29612.1 Orf15 Not tested SaPIbov Protein 2e-55 45
SAB1905c YP_417364.1 mobile element-associated protein Not tested SaPIbov2 Protein 1e-55 45
SAR0374 YP_039831.1 hypothetical protein Not tested SaPI4 Protein 9e-56 45