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Name : tnp'' (Sca_1387) Accession : YP_002634477.1 Strain : Staphylococcus carnosus TM300 Genome accession: NC_012121 Putative virulence/resistance : Unknown Product : transposase (fragment 2) Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3464 EC number : - Position : 1403101 - 1404231 bp Length : 1131 bp Strand : + Note : Similar to C-terminal part (aa 41-438) of transposase for ISSha1 [Staphylococcus haemolyticus JCSC1435](BAE03687): 438 aa ,(Q06126) Transposase for insertion sequence element IS1001,InterPro: Transposase IS204/IS1001/IS1096/IS1165; Hypothetical protein DNA sequence : ATGAAGAATTCCCGTATTACGATACCTAAGGTATCTGAAAGACAAGCCTATTTGAATCTGAAAAAGCAGCGTTTTTACTG TAAGCACTGCTGTACGCACTTCACTGCTGAAACAAAAATAGTTGAAAGATATTGCCATATTTCAGATCATATACGTTTAG CTGTTTTGCAGAAAGCTACCGAAATCCGTTCTCAAAAGTCAATTGCTGAATCTTGTGCTGTCGGGGCTTCTACAGTTGCT CGGATGATAGATAAATCTGCTTCTCAGATTGCTCAAAAGCCGTTCAGTGCTTTGCCTGAACATTTAATGATGGATGAATT CAAGAACGTCAAGCATGTCAGCCATAATATGAGTTTTATTTATGCTGATGCCGTGACTCACCGTATCGTAGATATTGTTC CCGATCGCAGATTGGCAGCTCTGAAAACGCACTTTTATCGTTATTCACTTGCTGAAAGACAACGTGTAAAGACTGTATCT ATCGATATGTACGAACCCTATATGTCTTTGATTAATGAAGTATTCCCTAATGCCAGAATTATTATAGACCGATTTCATAT TGTACAATCATTGAATCGCGCTTTGAATATGACTCGTGTCAGTGTTATGAATACTTTCCGAAATAACGACAGACCGCTTT ACAATAAATATAAACGTTATTGGAAACTGCTTTTGAAACCTTATGAACAATTGGAGATGTTCGAATATAATAAAGTTCCT TTGTTCAAACAATGGAAAACAACCAAAGGAATCGTAGATTTCTTATTGGATTTTGATGATAAACTGTTAAATACTCATTA CTACGTCCACCAGCTGCGTTATGCATTAAAAGAAAATGATGAACAATTATATACATCAACCATACAGGCAATCAACATGG GGACCATCGCCCCCAAACTTAAAATTGCCGTCAGAACACTTAAAAATCATCACGACATGATATTGAATACTTTGGAATAT TCGAATCTGACCAACGGTCCGCTCGAAGGTATTAATAATAAAATCAAACTGATAAAAAAGGTTTCTTTCGGTTATAGAAA CTTCACTAATTTGCGCAATCGTATTATTTTATGTACGAGACTTTTTTCCTCAAATCCTAAAAAAGAGATTAAGCAGCTAA AAGCTGCCTAA Protein sequence : MKNSRITIPKVSERQAYLNLKKQRFYCKHCCTHFTAETKIVERYCHISDHIRLAVLQKATEIRSQKSIAESCAVGASTVA RMIDKSASQIAQKPFSALPEHLMMDEFKNVKHVSHNMSFIYADAVTHRIVDIVPDRRLAALKTHFYRYSLAERQRVKTVS IDMYEPYMSLINEVFPNARIIIDRFHIVQSLNRALNMTRVSVMNTFRNNDRPLYNKYKRYWKLLLKPYEQLEMFEYNKVP LFKQWKTTKGIVDFLLDFDDKLLNTHYYVHQLRYALKENDEQLYTSTIQAINMGTIAPKLKIAVRTLKNHHDMILNTLEY SNLTNGPLEGINNKIKLIKKVSFGYRNFTNLRNRIILCTRLFSSNPKKEIKQLKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | YP_251945.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 8e-117 | 65 |
| tnp | YP_251995.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 6e-117 | 65 |
| tnp | NP_371686.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 1e-64 | 43 |
| SA1006 | NP_374278.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 1e-64 | 43 |
| SACOL1879 | YP_186706.1 | IS1181 transposase | Not tested | vSa¥â | Protein | 8e-65 | 43 |
