|
Name : polA (Sca_1297) Accession : YP_002634387.1 Strain : Staphylococcus carnosus TM300 Genome accession: NC_012121 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 1304049 - 1306679 bp Length : 2631 bp Strand : - Note : similar to DNA polymerase I polA, (EC 2.7.7.7),Bacillus stearothermophilus, 876AA, Expect = 0.0,Identities = 471/877 (53%), Positives = 619/877 (70%),Gaps = 7/877 (0%),(O34996) DNA polymerase I (EC 2.7.7.7) (POL I),InterPro: DNA polymerase family A; Hypot DNA sequence : GTGGAAAAATTAGTATTGATTGATGGAAATAGTTTAAGTTTCCGCGCATTTTATGCTTTACCTCTTTTGACAAATCGTGC AGGTATCCATACAAATGCTGTATATGGATTCGCAATGTTATTAGAAAAAATTAAAAAAGAAGAACAGCCGACAAATTTTT TAGTTGCATTTGATGCAGGCAAAACAACATTCAGACATGAAACATTCGGTGATTATAAAGGCGGCAGACAAAAGACACCA CCAGAATTGAGCGAACAATTTCCTTTAATTCGCCAATTATTAGATGCTTATCAGATTAAACATTATGAATTAGAGAACTA TGAAGCGGATGATATCATAGGGACATTAAGTAAAGAAGCTGATAAAGCGGGTATCCAAACGATTATTGTTACAGGAGACA GAGATTTAACACAACTGGCTTCTGATAATGTAACAATTTATTATACGAAAAAAGGGGTTACAGATGTAGACCACTATACA CCTGAATTTATTGCTGAAAAGTATAATGGTTTAAAACCTTCTCAAATCATTGATATGAAAGGATTAATGGGTGATACATC TGATAATATTCCAGGTATTGCTGGTGTTGGCGAAAAAACAGCCATTAAGCTCTTAAATCAATTCGAAACTGTTGAAAATT TATATGAACATATTGATGAAGTGTCTGGCAAAAAATTAAAAGAAAAACTTGAAAATGGACAAGAAGATGCATTCATGAGC AAACAATTAGCTACAATTAAACGAGATAGTCCAATTGAAGTTTCATTAAAAGATACAAAACTACCTGACGATGTAGATCA AACTGCAAAAATAGATTTGTTTAAAGAATTAGATTTTAAACAAATGCTTAATCAAATCGACGTAAGTGCAGAAGATAAAA CAGAAGAAAAAAGAGAATACGAAGTAGAACACAACTTCGAAAATATCAACTTCAACGATTTATCAGAAGCATCAATTCAT TTTGAAGTGGATGAAGGAGACTATTTAACAGCAGATATTCTTAAGTTCGGCATTCAAGCTGATGGACATTTTGTTGTCAT TAATGCGGAACAAATTAATGACTATCCTGAATTAGTTGAATGGTTAGAGAATGATCAAACAAGAAAACGTGTATATGATG CTAAAAAAACTTATGCTGAAGCGCATCGCCTGAATATCGATATTAAAAATGTTTCATTCGATATTATGTTAGCAAGTTAT ATATTAGACCCATCAAGAAGTATTGATGATGTTTATTCAGTTGTTCATAATTACGGTCAAAATTACGTGGCTGAAGAAGT AAATATTTACGGTAAAGGACGTAAAAGACAAATACCTGAAGATGAGGTACTTGATACCTATATCGCTTCTATTTTAGATG CAATTTCTGAAAGTACACCAATTATGTATGATCAGCTTGAAGAGTTTAATCAACTTGATTTATTTGAATCATTAGAGCTT CCGCTCGCGCGTATTTTAGGAGAAATGGAAGAACTTGGTATTTATACAGATGTTGATGAACTAAAAGAAATGGAAAAAGA AATTCAAGGTAAATTAGATACCTTGATTACACGTATACATGATGCTGCAGGTGAAGACTTTAATATTAATTCACCTAAAC AGTTAGGTGTAGTACTTTTTGAAAATCTCAAATTGCCTGTTATTAAAAAAACAAAAACTGGTTATTCAACTGCTGTAGAT GTACTTGAGCAATTACAAGGTGAACATCCTATTATTGATGATATACTCGAATATCGTCAGCTTTCTAAATTACAATCAAC GTATATCGAAGGTTTACAAAAAGTAATTCAAAATGACCATCGGATTCATACGCACTTCAATCAAACATTAGCTCAAACCG GAAGATTGTCTTCTGTGGATCCAAATTTACAAAATATACCAGTAAGATTAGAAGAAGGACGCAGAATCCGTAAAGCATTC AAACCGGCAGAACCAGGAAATGTTATCTTGTCAGCTGACTATTCACAAATCGAATTACGCGTGCTTGCGCATATTACTCA AGATGAAAGTATGATAAAGGCATTTAGAGAAGGGCATGATATTCATACGGCAACTGCAATGAAAGTATTCGGTGTAGAAC CAGACGAAGTAGATAGTTTAATGCGCAGACAAGCGAAAGCAGTCAACTTTGGTATTGTTTATGGAATCAGTGATTACGGT TTAAGTCAAAGTCTTGGTATTACTAGAAAAGCTGCAAAGCAATTTATTGATGATTATTTAGATAGCTTCCCTGGTGTAAA ACAATATATGAGCGATATTGTAAAAGATGCCAAAGCTAAAGGATACGTAGAAACTTTATTACACCGCCGTAGATATATTC CGGATATTACAAGCCGTAATTTTAATCGTAGAAGCTTCGCGGAACGAACAGCTATGAATACACCAATTCAAGGCAGTGCT GCTGATATTATAAAATTAGCCATGGTGAACTTTGATAAAGAAATTAAAAATAAAGATTTTCATGCGCATTTACTTTTACA AGTGCACGATGAGTTGATATTTGAACTTCCTGAAGAAGAAGTAGAAGCATTCAGTGCATTTATTGAAGATATAATGGATA ATGCTATAGATTTAGACGTACCATTGCAAGTGGACACAAATTATGGCCCAACATGGTATGATGCAAAATAG Protein sequence : MEKLVLIDGNSLSFRAFYALPLLTNRAGIHTNAVYGFAMLLEKIKKEEQPTNFLVAFDAGKTTFRHETFGDYKGGRQKTP PELSEQFPLIRQLLDAYQIKHYELENYEADDIIGTLSKEADKAGIQTIIVTGDRDLTQLASDNVTIYYTKKGVTDVDHYT PEFIAEKYNGLKPSQIIDMKGLMGDTSDNIPGIAGVGEKTAIKLLNQFETVENLYEHIDEVSGKKLKEKLENGQEDAFMS KQLATIKRDSPIEVSLKDTKLPDDVDQTAKIDLFKELDFKQMLNQIDVSAEDKTEEKREYEVEHNFENINFNDLSEASIH FEVDEGDYLTADILKFGIQADGHFVVINAEQINDYPELVEWLENDQTRKRVYDAKKTYAEAHRLNIDIKNVSFDIMLASY ILDPSRSIDDVYSVVHNYGQNYVAEEVNIYGKGRKRQIPEDEVLDTYIASILDAISESTPIMYDQLEEFNQLDLFESLEL PLARILGEMEELGIYTDVDELKEMEKEIQGKLDTLITRIHDAAGEDFNINSPKQLGVVLFENLKLPVIKKTKTGYSTAVD VLEQLQGEHPIIDDILEYRQLSKLQSTYIEGLQKVIQNDHRIHTHFNQTLAQTGRLSSVDPNLQNIPVRLEEGRRIRKAF KPAEPGNVILSADYSQIELRVLAHITQDESMIKAFREGHDIHTATAMKVFGVEPDEVDSLMRRQAKAVNFGIVYGISDYG LSQSLGITRKAAKQFIDDYLDSFPGVKQYMSDIVKDAKAKGYVETLLHRRRYIPDITSRNFNRRSFAERTAMNTPIQGSA ADIIKLAMVNFDKEIKNKDFHAHLLLQVHDELIFELPEEEVEAFSAFIEDIMDNAIDLDVPLQVDTNYGPTWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 48 |
