Gene Information

Name : xerD (Sca_1123)
Accession : YP_002634216.1
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Unknown
Product : putative site-specific recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1141896 - 1142795 bp
Length : 900 bp
Strand : -
Note : (Q7ZAJ2) Tyrosine recombinase xerD,InterPro: Phage integrase; Hypothetical protein

DNA sequence : 
ATGGAAACAAATTATGATGTTGTTATTGAAGAATATTTAAAATTCATTCAAATTGAAAAAGGATTAAGTGCTAATACGAT
TGGTGCTTATAGAAGAGATTTGAATAAATACAAAGAGTATTTAGTATTAAAAAAGATTAATAATATAGATTTTATTGATC
GAGAGATTATTCAACAATGTTTAGGATATTTACATGATGACGGTCATTCCGCAAAATCAATTGCGCGTTTTATTTCAACA
GTAAGAAGTTTCCATCAATTTGCGTTGAGAGAACGTTATGCAGCTAAAGATCCTACTGTATTGATTGAAACACCTAAATA
CGAGCGCCGGTTACCTGACGTATTAGATGTAGAGGACGTTCTTGCTTTACTTGAAACGCCGGATTTATCTAAAAATAACG
GTTATCGAGATCGAACAATTCTGGAATTATTATATGCGACAGGTATGCGTGTAACGGAATTGATACATGTTCGTGTAGAA
GATGTCAATTTGATTATGGGATTTGTACGGGTTTTCGGTAAGGGTAGCAAAGAACGTATCATCCCTTTAGGCGAAACTGT
CATCGATTATTTGAAAAAATACATTGAAACAGTACGTCCTCAATTGTTAAAACAAACAGTAACAGATGTATTATTTTTAA
ACCTTCATGGTAAACCATTATCAAGACAGGGAATTTGGAAACTTATAAAGCAATATGGTGTTAAAGCAAATATTAAAAAG
AAATTAACACCTCACTCACTTCGCCACTCGTTTGCGACACATTTGCTTGAAAATGGTGCTGATTTAAGAGCTGTACAAGA
AATGTTAGGACATTCGGATATTTCTACAACTCAACTCTATACACATGTTTCAAAATCACAAATCAGAAAAATGTATAATG
AATTCCATCCAAGAGCCTGA

Protein sequence : 
METNYDVVIEEYLKFIQIEKGLSANTIGAYRRDLNKYKEYLVLKKINNIDFIDREIIQQCLGYLHDDGHSAKSIARFIST
VRSFHQFALRERYAAKDPTVLIETPKYERRLPDVLDVEDVLALLETPDLSKNNGYRDRTILELLYATGMRVTELIHVRVE
DVNLIMGFVRVFGKGSKERIIPLGETVIDYLKKYIETVRPQLLKQTVTDVLFLNLHGKPLSRQGIWKLIKQYGVKANIKK
KLTPHSLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHVSKSQIRKMYNEFHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 7e-48 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 7e-48 44