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Name : treC (Sca_0110) Accession : YP_002633209.1 Strain : Staphylococcus carnosus TM300 Genome accession: NC_012121 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 111107 - 112744 bp Length : 1638 bp Strand : + Note : (P39795) Trehalose-6-phosphate hydrolase (EC 3.2.1.93) (Alphaalpha-phosphotrehalase),InterPro: Alpha amylase catalytic domain,Alpha amylase catalytic subdomain; Hypothetical protein DNA sequence : ATGCAACAAAATGATTGGAGAAAATCGGTAGTTTATCAAATCTATCCAAAGTCATTTAACGATACAACAGGTAATGGAGT AGGAGACTTAAATGGAATTATTGAGAAAATGGATTATCTTGAATATCTAGGTGTGGGCTATCTTTGGTTAACACCTGTAT ATCAATCTCCTATGAATGATAATGGATATGATATCAGTGATTATTTGAGTATTAATGAAGATTTTGGTACGAAAGAAGAA TTGAAGCAACTTTTAGATGAAGCGCATCAGCATAATTTGAAAGTGATGATGGATATTGTTATCAATCACACATCAACAGA ACATGAGTGGTTTAAAGCAGCTATTTCTGAGCCAGATAATCCTTATCGTGATTATTACTTTTTCCGTAAATCAGCAAAAG AAGGTGTACCACCTACAAATTGGGAATCGAAATTCGGTGGCAATGCATGGAAGTATGATGAAAAAAGCGATGAGTATTAT TTGCATCTTTTTGATGTGACGCAAGCAGATTTAAATTGGGAAAATCCTAAAGTAAGAGAAGCACTTTACGACATGATTAA TTATTGGATTGACTTTGGTGTAGATGGTTTTCGTTTTGATGTCATCAACCTTATTTCAAAAGGAGAATTTCGTGATTCTG ATAAAATCGGCAAAGAATTTTACACAGATGGACCACGTGTTCATGAATTTATTCATGAAATGAACCGCAATACTTTTGGT AATAAAGATTTGATGACAGTCGGTGAAATGTCTTCTACAACGATTGACAATTGTATTAAATATACAAATCCAGAACGTGA AGAATTGAGTAGTGTGTTCAATTTCCATCATTTAAAAGTTGATTATGCAGATGGTGAAAAATGGACATATGCGGATTTTG ATTTTATTGAATTAAAACGCATTTTGATGGAATGGCAGATTGGTATTCATGATGGTAATGGTTGGAATGCGATTTTCTGG TGTAATCATGATCAGCCTCGTGTTGTATCTCGTTTTGGAGATGACTCAACAGAAGCATTACGTCAAAAGAGTGCAAAAAT GTTAGCAGTAGCTTTACACTTACTGCAAGGCACACCTTATATTTATCAAGGTGAGGAAATAGGTATGACTAATCCGCACT TCACAAGCATCAATCAATATCGAGATGTAGAATCATTGAATGCTTATGATAATTTGAAAGCACAAGGTTATGCGGATAAA GAAATTATGCAGATTTTAGACCAGAAATCTCGTGACAACTCTCGTACACCTATGCAATGGACAGCAGGTGAAAATGCTGG GTTTACAAGCGGCACACCTTGGATTGATATCCCAAGTAATTATCAACATATCAATGTAGAAGATGAAGTTGAGAATGAAC ATTCAATTTTACAAACATATCGTGAATTAATTCGATTGCGTCATGAACATGATATTATTACCTATGGTGATATTTTGCCG CTATATATGGATGACCCTAATTTAATGATATACCAACGCAGTTATGAAGGTAAAAAATGGTTAGTCATAGCTAACTTCAG TAAAGAAGCGGTGATGGTACCAGAAGATTTAGATACAGATGGCGAAGTCATTCTAGAACGAGGTACTATCAATAATGGAG AAATCGAAGGCTATGGGGCAATTGTCATCGAACAGTAA Protein sequence : MQQNDWRKSVVYQIYPKSFNDTTGNGVGDLNGIIEKMDYLEYLGVGYLWLTPVYQSPMNDNGYDISDYLSINEDFGTKEE LKQLLDEAHQHNLKVMMDIVINHTSTEHEWFKAAISEPDNPYRDYYFFRKSAKEGVPPTNWESKFGGNAWKYDEKSDEYY LHLFDVTQADLNWENPKVREALYDMINYWIDFGVDGFRFDVINLISKGEFRDSDKIGKEFYTDGPRVHEFIHEMNRNTFG NKDLMTVGEMSSTTIDNCIKYTNPEREELSSVFNFHHLKVDYADGEKWTYADFDFIELKRILMEWQIGIHDGNGWNAIFW CNHDQPRVVSRFGDDSTEALRQKSAKMLAVALHLLQGTPYIYQGEEIGMTNPHFTSINQYRDVESLNAYDNLKAQGYADK EIMQILDQKSRDNSRTPMQWTAGENAGFTSGTPWIDIPSNYQHINVEDEVENEHSILQTYRELIRLRHEHDIITYGDILP LYMDDPNLMIYQRSYEGKKWLVIANFSKEAVMVPEDLDTDGEVILERGTINNGEIEGYGAIVIEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-123 | 48 |
