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Name : serS (NAMH_0077) Accession : YP_002606518.1 Strain : Nautilia profundicola AmH Genome accession: NC_012115 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 62475 - 63725 bp Length : 1251 bp Strand : - Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGATAGATTTAAAGCTGCTGGAAAAAGATTTTGAAAACGTTTCAAAACGCCTTAAATTAAAAGGTGTAGATGAAAATAA CCTGGAAGAAATCAAAAAACTATTCAAAGAAAAAAAAGAGATAAAAACAACACTTGATAAATTATTAGAACAACGAAATA TTCTATCAAAACAAATCGGAAATTTTATGAAAAACGGTGAAAAAGATAAAGCTGAAGAAATAAAAAAAGAAGTAAACAGT TTAAAAGAAGAAATTTCTGTTCTTGAAGAAAAATTAAAGACAATAGAAGATTCTTTACTGCAAAAAGCTTTGGTAATTCC AAACATTCCGGATGAAGACGTCCCTATAGGAAAAGATGAGGATGAAAACGTTGAAATTAAAAGAGTTGGTGAAATACCTA CCTTCGATTTCGAACCCAAACCTCACGACGAACTTGGAGAAAAACTTGACTGGCTCGATTTCACAAGAGGTGTAAAACTG GCAAAAAGCCGTTTTACTGTAATGAAAAAAGACGCCGCAAGACTTGAAAGAGCTCTTATTAACTTCTTTTTAGACCACAA CAGGGAATGGGGATTTGAAGAAGTTTATGTTCCGTTTATGGTAAACAGGGAAACAATGACAGGTACCGGTCAGCTTCCTA AATTTGAAGAAGATTTATTTAAAATTGAAAACGAAGAACTGTATCTGATTCCTACGGCAGAAGTACCGTTGACAAACCTT TTCAGAGATGAAATTATCACAAACCTTGATGAGCCTATTAAATTAACGGCTTATACTCCTTGTTTCAGAAAAGAAGCGGG GAGTTACGGAAAAGACACCAAAGGTATAATCAGACAACACCAATTCGACAAAGTGGAGCTTGTAGCAATTACCAAACCTG AAGACAGTGACAAAATGTTTGACGAAATGGTTGCTTGTGCATCAAACGCACTTGAAAAATTGGGGCTCCCTTACAGACAG CTTATGCTATGTACGGGAGATTTAGGCTTCAGTGCCGCGAAAACAATAGACCTTGAAGTGTGGATACCTTCTCAAAACAA ATACAGAGAAATAAGCTCGGTATCAAACACGAGAGATTTTCAAGCAAGACGTGCAAAAATCCGATATAAAGACGGCAAAA AAAACAAACTCGTTCATACGTTAAACGGAAGCAGTTTAGCAGTTGGAAGAACATTAGTGGCCATTATGGAAAATTATCAG ACAAAAGACGGAAATATACAAATACCTGAAGCGTTAAAAAAATATCTATAA Protein sequence : MIDLKLLEKDFENVSKRLKLKGVDENNLEEIKKLFKEKKEIKTTLDKLLEQRNILSKQIGNFMKNGEKDKAEEIKKEVNS LKEEISVLEEKLKTIEDSLLQKALVIPNIPDEDVPIGKDEDENVEIKRVGEIPTFDFEPKPHDELGEKLDWLDFTRGVKL AKSRFTVMKKDAARLERALINFFLDHNREWGFEEVYVPFMVNRETMTGTGQLPKFEEDLFKIENEELYLIPTAEVPLTNL FRDEIITNLDEPIKLTAYTPCFRKEAGSYGKDTKGIIRQHQFDKVELVAITKPEDSDKMFDEMVACASNALEKLGLPYRQ LMLCTGDLGFSAAKTIDLEVWIPSQNKYREISSVSNTRDFQARRAKIRYKDGKKNKLVHTLNGSSLAVGRTLVAIMENYQ TKDGNIQIPEALKKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-90 | 52 |
