Gene Information

Name : NAMH_0601 (NAMH_0601)
Accession : YP_002607017.1
Strain : Nautilia profundicola AmH
Genome accession: NC_012115
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 533698 - 534369 bp
Length : 672 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGGTTAAACTAACAGACGTCCATAAATCCTATAAAACGGGGGAAATCGAGGTAAAAGTACTTGAAGGGCTTGATCTGGA
GATTGAAAAAGGCGAGTTTGTGGCATTGATAGGCCCGAGCGGAAGCGGAAAAACCACTATTCTAAACATAATCGGCGCAC
TTGATCGGGCTGACAGCGGAAAAGTGGAAGTTGCGGGTGTGGATATTACAAATAAAAACGAAAAAGAGCTTACTAAATTC
AGGGCCGATCATTTGGGATATGTTTTTCAGGATTTTAACCTAATTGAAGTTTTCAGCGTATTTGAAAACGTTAATTTTCC
TCTTAAGGTAATACACAAAAGAAAAGATGATGATAAAGTAATTAACTTGCTGCAGGATATCGGAATGACGGATCAGATAA
ATAAATTTCCCGACCAGCTCTCTGGCGGACAAAAGCAAAGGGTTGCTGTGGCAAGGGCTCTTGTTACGGATCCTTTGATT
GTTTTGGCGGATGAGCCTACGGCTAATCTTGACAGTGTGACAAGTCACAGGGTTATTGAGCTGATGCGTAAAATGCAGAG
GGAATTTAATACGACTTTTATATTCTCCACACACGATACTCATCTGATAGACGAGGTAGACAGAGTGCTTTATCTGCAGG
ATGGAAAAATTATCAAAGATGAAAGGAAATAA

Protein sequence : 
MVKLTDVHKSYKTGEIEVKVLEGLDLEIEKGEFVALIGPSGSGKTTILNIIGALDRADSGKVEVAGVDITNKNEKELTKF
RADHLGYVFQDFNLIEVFSVFENVNFPLKVIHKRKDDDKVINLLQDIGMTDQINKFPDQLSGGQKQRVAVARALVTDPLI
VLADEPTANLDSVTSHRVIELMRKMQREFNTTFIFSTHDTHLIDEVDRVLYLQDGKIIKDERK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-39 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-38 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NAMH_0601 YP_002607017.1 ABC transporter ATPase CP001581.1.gene598.p Protein 1e-38 41
NAMH_0601 YP_002607017.1 ABC transporter ATPase CP001581.1.gene798.p Protein 1e-37 41