Gene Information

Name : NAMH_0585 (NAMH_0585)
Accession : YP_002607001.1
Strain : Nautilia profundicola AmH
Genome accession: NC_012115
Putative virulence/resistance : Resistance
Product : amino acid permease ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 521537 - 522274 bp
Length : 738 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGGAACCGATTATTCAAATGAAAGATATAGAAAAATATTACGGTAACTTCCATGCTTTAAAGGGCGTTAATTTTAACGT
TGATAAAGGTGAAGTTGTCGTTGTATGCGGTCCCAGCGGAAGTGGTAAATCAACTTTAATCCGCTGTATTAACAGACTTG
AAGATATTGACAGTGGGAAAATTGTTGTAGACGGACAAGATCTGTATAATAAAAAAACAAACATAAACAAACTTCGTCAA
GAAGTCGGAATGGTATTCCAGCATTTTAATCTTTTTCCGCATTTAACAATTATGGAAAATATTACAATAGCACCTATTAA
AGTTAAAAAAATGCCTAAAAAAGAAGCTGAAGAACTTGCAATGCAGCTTCTTGAAAGAGTAAAAATTCCTCATCAGGCAA
ATAAATACCCAAGTGAACTTAGTGGTGGTCAAAAACAGAGGGTTGCTATCGCAAGAACTCTTGCAATGAAGCCTAAAATC
ATTCTTTTTGACGAACCGACAAGTGCACTTGACCCGGAAATGATCGGTGAGGTTTTGGATGTTATGAAAGAGCTTGCACG
TGAAAACTATACAATCGTGTGTGTAACACACGAAATGGGATTCGCAAGGGAAGTTAGTGACAGAATCGTATTTATGGACG
CGGGTGAAATTGTTGAGGAAAACACACCTGAAGAGTTTTTCAACAATCCTAAAACTGACAGAGCTAAGAAATTCCTTAGC
GAAATTTTACATCACTAA

Protein sequence : 
MEPIIQMKDIEKYYGNFHALKGVNFNVDKGEVVVVCGPSGSGKSTLIRCINRLEDIDSGKIVVDGQDLYNKKTNINKLRQ
EVGMVFQHFNLFPHLTIMENITIAPIKVKKMPKKEAEELAMQLLERVKIPHQANKYPSELSGGQKQRVAIARTLAMKPKI
ILFDEPTSALDPEMIGEVLDVMKELARENYTIVCVTHEMGFAREVSDRIVFMDAGEIVEENTPEEFFNNPKTDRAKKFLS
EILHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-24 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NAMH_0585 YP_002607001.1 amino acid permease ATP-binding protein CP001581.1.gene798.p Protein 5e-29 41