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Name : NAMH_1590 (NAMH_1590) Accession : YP_002607977.1 Strain : Nautilia profundicola AmH Genome accession: NC_012115 Putative virulence/resistance : Virulence Product : carbohydrate isomerase, KpsF/GutQ family Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 1492861 - 1493805 bp Length : 945 bp Strand : - Note : identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : GTGGATTTTAAAAAAATAGCAAGAGAAGTACTTGAAATAGAGGCAAACGAGCTTTTAAACGCAAGTGTTGAAGGTATTGA AAAAGCTGTTGAAATAGCTTATAACACCAAAGGTAAGTTAATTGTAACAGGAGTAGGAAAATCTGGGCTAATTGGCTCTA AAATCGCTGCAACATTGGCAAGTACCGGGACTCCCAGTTTCTTTTTACATCCTACTGAGGCTTTACATGGAGATCTTGGA ATGATTACGAAAGACGACAGTGTTTTGGCTATTAGTTACTCTGGAGAGAGTGAAGAGCTTATTAAAATTCTTCCTCATAT TAAAAGATTCGAAGTTCCTTTAATAGCCATGACAGGGAAAATGAATTCAACTCTTGCGAGATATGCGGATGTGGTTTTAA ACATTCATGTTAATAAAGAAGCCTGTCCGCTAAATATAGCTCCTACAAGTTCGACGACACTTACTCTTGCTATGGGGGAT GCATTGGCCGTATGCCTTATGAAAAAAAGGAATTTTACAAAAGAAGATTTTGCTTCGTTTCATCCCGGAGGAAGTCTTGG GAAAAAACTGTTTGTAAAAGTAAAAGATCTTATGAAAAGAGAGTTCCCTGTAGCTGATGAAGATGATACGCTTCAAGAAG CGATTATTAAAATGACTGAAGGTAAGCTTGGACACGTATTGTTTTTGGATAATAAGAGAGTAAAAGCAATTCTCAGTGAC GGGGATTTAAGAAGAGCAATGATGAGTGATAAATTCGACTTAAAAGCAAAAGCGATAGATTTTGCAACTATTGATCCTAA AACGATATCTAAAGAAGTGCTTGCTGCAGATGCACTTAAGTTTATGGAAGACAATAAGATACAGTTTCTGCCTGTAACGG ACGAAAACGGCAATATTGCCGGTGTTATACATATCCATAACTTGGTGGAAGCGGGAATTAAGTAA Protein sequence : MDFKKIAREVLEIEANELLNASVEGIEKAVEIAYNTKGKLIVTGVGKSGLIGSKIAATLASTGTPSFFLHPTEALHGDLG MITKDDSVLAISYSGESEELIKILPHIKRFEVPLIAMTGKMNSTLARYADVVLNIHVNKEACPLNIAPTSSTTLTLAMGD ALAVCLMKKRNFTKEDFASFHPGGSLGKKLFVKVKDLMKREFPVADEDDTLQEAIIKMTEGKLGHVLFLDNKRVKAILSD GDLRRAMMSDKFDLKAKAIDFATIDPKTISKEVLAADALKFMEDNKIQFLPVTDENGNIAGVIHIHNLVEAGIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-51 | 42 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 5e-52 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 9e-52 | 42 |
