Gene Information

Name : gspG (NAMH_0014)
Accession : YP_002606456.1
Strain : Nautilia profundicola AmH
Genome accession: NC_012115
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 14678 - 15097 bp
Length : 420 bp
Strand : +
Note : identified by match to protein family HMM PF07963; match to protein family HMM PF08334; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532

DNA sequence :
ATGAAAAAAGCTTTCAGTTTGATTGAAGTAATGATTGTTGTTGTTATTTTGGGACTTATTGCATCCCTTGTGGTTCCGAA
TCTTATAGGTCAGAGTGAACAGGCCAAAAAGAAACTTGTATGTATTCAGATGAAATCACTTAAAGATGCTCTTGATTCAT
TTAAAATAGAAGAAGATACATATCCGAGTACACAGGAAGGGCTTGAATCCTTAATAACAAATCCGAATCCTCAAAAATAT
AAAAATTATCCTGAAAAAGGTTTTTTAAATACTAAGAGTCTTCCAAAAGACCCATGGGGGAACGAATATATTTATATTAA
TGATAATGGGAATATTGAAATAATTTCATTAGGTGCAGATGGCAAAGAAGGCGGGAGCGGAGAAAATAAAGATATTAAAT
TTAGCGAATGCGTAAATTAG

Protein sequence :
MKKAFSLIEVMIVVVILGLIASLVVPNLIGQSEQAKKKLVCIQMKSLKDALDSFKIEEDTYPSTQEGLESLITNPNPQKY
KNYPEKGFLNTKSLPKDPWGNEYIYINDNGNIEIISLGADGKEGGSGENKDIKFSECVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-26 45
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-26 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_002606456.1 general secretion pathway protein G VFG0180 Protein 2e-25 49
gspG YP_002606456.1 general secretion pathway protein G VFG2050 Protein 6e-27 45
gspG YP_002606456.1 general secretion pathway protein G VFG1871 Protein 2e-24 42